RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 ULBP3Q9BZM4 244 aa9.57□□□□□ -0.88
TOP3A-209ENST00000580095 NXF5Q9H1B4 397 aaKnown RBP9.57□□□□□ -0.88
TOP3A-209ENST00000580095 GHITMQ9H3K2 345 aa9.57□□□□□ -0.88
TOP3A-209ENST00000580095 COQ3Q9NZJ6 369 aa9.57□□□□□ -0.88
TOP3A-209ENST00000580095 HS3ST3A1Q9Y663 406 aa9.57□□□□□ -0.88
TOP3A-209ENST00000580095 PCDH15Q96QU1 1955 aa9.57□□□□□ -0.88
TOP3A-209ENST00000580095 UNC13CQ8NB66 2214 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 PRAMEF2O60811 474 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 OR2B3O76000 313 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 OR2T7P0C7T2 308 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 AP2S1P53680 142 aaPredicted RBP9.56□□□□□ -0.88
TOP3A-209ENST00000580095 TAS2R43P59537 309 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 ACTC1P68032 377 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 ACTA1P68133 377 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 TOMM34Q15785 309 aaPredicted RBP9.56□□□□□ -0.88
TOP3A-209ENST00000580095 HSD17B12Q53GQ0 312 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 TMEM255AQ5JRV8 349 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 KIAA0895LQ68EN5 471 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 SHISA6Q6ZSJ9 500 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 LINGO2Q7L985 606 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 ZNF550Q7Z398 422 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 TCTE3Q8IZS6 198 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 LINC00518Q8N0U6 118 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 MS4A15Q8N5U1 240 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 OR2T27Q8NH04 317 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 INTS12Q96CB8 462 aaKnown RBP9.56□□□□□ -0.88
TOP3A-209ENST00000580095 KTI12Q96EK9 354 aaPredicted RBP9.56□□□□□ -0.88
TOP3A-209ENST00000580095 SLC38A3Q99624 504 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 ALG12Q9BV10 488 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 MED28Q9H204 178 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 LIN7BQ9HAP6 207 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 ANKRD10Q9NXR5 420 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 HAO2Q9NYQ3 351 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 C11orf98E9PRG8 122 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 ZNF780AO75290 641 aaPredicted RBP9.56□□□□□ -0.88
TOP3A-209ENST00000580095 TOXO94900 526 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 PLGP00747 810 aaPredicted RBP9.56□□□□□ -0.88
TOP3A-209ENST00000580095 TCRBP04435 133 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 GALP22466 123 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 RBM34P42696 430 aaKnown RBP9.56□□□□□ -0.88
TOP3A-209ENST00000580095 CTXN1P60606 82 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 GPR85P60893 370 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 LTBQ06643 244 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 ZNF141Q15928 474 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 CORO6Q6QEF8 472 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 FCRLAQ7L513 359 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 TPRA1Q86W33 373 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 OR6C4Q8NGE1 309 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 OR10AC1Q8NH08 325 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 ZFAND1Q8TCF1 268 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 CREB3L1Q96BA8 519 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 MESP1Q9BRJ9 268 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 NANSQ9NR45 359 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 KLK11Q9UBX7 282 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 SLC23A1Q9UHI7 598 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 TEKT2Q9UIF3 430 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 KLHL21Q9UJP4 597 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 FBXL21Q9UKT6 434 aa9.56□□□□□ -0.88
TOP3A-209ENST00000580095 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.55□□□□□ -0.88
TOP3A-209ENST00000580095 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.55□□□□□ -0.88
TOP3A-209ENST00000580095 OGG1O15527 345 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 DOK2O60496 412 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 GMDSO60547 372 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 OR7A10O76100 309 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 PROS1P07225 676 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 GAAP10253 952 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 HOXB1P14653 301 aaPredicted RBP9.55□□□□□ -0.88
TOP3A-209ENST00000580095 SRMP19623 302 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 CD1CP29017 333 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 ERP29P30040 261 aaKnown RBP9.55□□□□□ -0.88
TOP3A-209ENST00000580095 PLA2G7Q13093 441 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 MAB21L1Q13394 359 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 MANEAQ5SRI9 462 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 PYHIN1Q6K0P9 492 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 LRRC69Q6ZNQ3 347 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 ZNF615Q8N8J6 731 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 ZSCAN1Q8NBB4 408 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 OR51A4Q8NGJ6 313 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 LHFPL5Q8TAF8 219 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 CCDC120Q96HB5 630 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 G6PC3Q9BUM1 346 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 WDR76Q9H967 626 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 NRIP3Q9NQ35 241 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 POLE3Q9NRF9 147 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 IKZF2Q9UKS7 526 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 ICAM5Q9UMF0 924 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 MRPS33Q9Y291 106 aaKnown RBP9.55□□□□□ -0.88
TOP3A-209ENST00000580095 CELSR3Q9NYQ7 3312 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 SPAG17Q6Q759 2223 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 A0A1W2PQ72 361 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 CHURC1-FNTBB4DL54 471 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 H0YC42 278 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 NUDT14O95848 222 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 C1QBP02746 253 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 ITPKBP27987 946 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 FNTBP49356 437 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 GPR143P51810 404 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 EGR4Q05215 589 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 GRM7Q14831 915 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 DPY19L2P2Q6ZN68 376 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms