RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 RASD1Q9Y272 281 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 NOX1Q9Y5S8 564 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 ZNF407Q9C0G0 2248 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 COL6A6A6NMZ7 2263 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 IRGMA1A4Y4 181 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 CYSRT1A8MQ03 144 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 B8ZZF3 427 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 LRRN3E7EW58 273 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 PLPP3O14495 311 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 BHLHE40O14503 412 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 EIF1AYO14602 144 aaKnown RBP12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 XKRYO14609 159 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 SURF4O15260 269 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 TLX2O43763 284 aaPredicted RBP12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 C1QL1O75973 258 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 PPP1R3DO95685 299 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 IGFBP1P08833 259 aaPredicted RBP12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 RPSAP08865 295 aaKnown RBP12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 CCDC159P0C7I6 412 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 IMPDH2P12268 514 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 IL11P20809 199 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 DAP3P51398 398 aaKnown RBP12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 TDGF1P3P51864 188 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 GFRA1P56159 465 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 CD47Q08722 323 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 CDK5R2Q13319 367 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 SLC25A30Q5SVS4 291 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 C6orf141Q5SZD1 244 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 HBMQ6B0K9 141 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 ACSM5Q6NUN0 579 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 UGT2A3Q6UWM9 527 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 Q6ZPB1 254 aaPredicted RBP12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 TRILQ7L0X0 811 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 PXKQ7Z7A4 578 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 JAZF1Q86VZ6 243 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 ENTHD1Q8IYW4 607 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 GHDCQ8N2G8 530 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 FAM26EQ8N5C1 309 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 IQCF1Q8N6M8 205 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 TCEANCQ8N8B7 351 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 OR8D4Q8NGM9 314 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 OR2V1Q8NHB1 315 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 NEIL3Q8TAT5 605 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 TMEM163Q8TC26 289 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 FBLIM1Q8WUP2 373 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 CPNE4Q96A23 557 aaPredicted RBP12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 CCNB1IP1Q9NPC3 277 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 NRIP3Q9NQ35 241 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 CMC2Q9NRP2 79 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 RASSF1Q9NS23 344 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 IER3IP1Q9Y5U9 82 aa12.49□□□□□ -0.41
CSNK1D-209ENST00000578904 MED12Q93074 2177 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 A0A1W2PNR3 127 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 A0A1W2PNV4 684 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 A6NIZ1 184 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 NPIPB13A6NJU9 1138 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 NPIPB4C9JG80 1138 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 MCIDASD6RGH6 385 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 PRR23D1E9PI22 279 aaPredicted RBP12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 C11orf98E9PRG8 122 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 AKAP8O43823 692 aaKnown RBP12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 SYNGR4O95473 234 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 IGHG3P01860 377 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 PRR23D2P0DMB1 279 aaPredicted RBP12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 ENPP1P22413 925 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 SDHAP31040 664 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 RAP1BP61224 184 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 RAP1AP62834 184 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 HSF1Q00613 529 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 LGALS3BPQ08380 585 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 C1DQ13901 141 aaKnown RBP12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 SF3B4Q15427 424 aaKnown RBP eCLIP12.48□□□□□ -0.414e-8■■■■□ 21.3
CSNK1D-209ENST00000578904 ZNF239Q16600 458 aaKnown RBP12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 OCLNQ16625 522 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 KCTD21Q4G0X4 260 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 KRTCAP3Q53RY4 240 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 THSD4Q6ZMP0 1018 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 GID4Q8IVV7 300 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 UEVLDQ8IX04 471 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 OR4Q3Q8NH05 313 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 IPCEF1Q8WWN9 437 aaPredicted RBP12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 ZNF566Q969W8 418 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 OXGR1Q96P68 337 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 KATNB1Q9BVA0 655 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 TXNIPQ9H3M7 391 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 FANCFQ9NPI8 374 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 TAS2R5Q9NYW4 299 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 UBAP1Q9NZ09 502 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 IL20RAQ9UHF4 553 aa12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 RPL36Q9Y3U8 105 aaKnown RBP12.48□□□□□ -0.41
CSNK1D-209ENST00000578904 A0A0J9YW62 118 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 LOC102725191A0A1B0GVB3 256 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 AQP7P3A6NL99 342 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 TNFSF11O14788 317 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 FAM20BO75063 409 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 WISP2O76076 250 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 AKR7A3O95154 331 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 TXNDC12O95881 172 aa12.47□□□□□ -0.41
CSNK1D-209ENST00000578904 BCL10O95999 233 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms