RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 VIMP08670 466 aaKnown RBP12.3□□□□□ -0.44
SMARCD2-205ENST00000577686 ETFAP13804 333 aa12.3□□□□□ -0.44
SMARCD2-205ENST00000577686 BGNP21810 368 aa12.3□□□□□ -0.44
SMARCD2-205ENST00000577686 RPS5P46782 204 aaKnown RBP12.3□□□□□ -0.44
SMARCD2-205ENST00000577686 GALK2Q01415 458 aa12.3□□□□□ -0.44
SMARCD2-205ENST00000577686 CEACAM16Q2WEN9 425 aa12.3□□□□□ -0.44
SMARCD2-205ENST00000577686 SLC9B1Q4ZJI4 515 aa12.3□□□□□ -0.44
SMARCD2-205ENST00000577686 FAM69AQ5T7M9 428 aa12.3□□□□□ -0.44
SMARCD2-205ENST00000577686 HHATQ5VTY9 493 aa12.3□□□□□ -0.44
SMARCD2-205ENST00000577686 BBS10Q8TAM1 723 aa12.3□□□□□ -0.44
SMARCD2-205ENST00000577686 DNAJA4Q8WW22 397 aaPredicted RBP12.3□□□□□ -0.44
SMARCD2-205ENST00000577686 ZMYND19Q96E35 227 aaPredicted RBP12.3□□□□□ -0.44
SMARCD2-205ENST00000577686 TMEM19Q96HH6 336 aa12.3□□□□□ -0.44
SMARCD2-205ENST00000577686 SORT1Q99523 831 aa12.3□□□□□ -0.44
SMARCD2-205ENST00000577686 EPYCQ99645 322 aa12.3□□□□□ -0.44
SMARCD2-205ENST00000577686 PAIP2Q9BPZ3 127 aaKnown RBP12.3□□□□□ -0.44
SMARCD2-205ENST00000577686 OCEL1Q9H607 264 aa12.3□□□□□ -0.44
SMARCD2-205ENST00000577686 DENND2DQ9H6A0 471 aaPredicted RBP12.3□□□□□ -0.44
SMARCD2-205ENST00000577686 TPT1P8Q9HAU6 139 aa12.3□□□□□ -0.44
SMARCD2-205ENST00000577686 KCNK9Q9NPC2 374 aa12.3□□□□□ -0.44
SMARCD2-205ENST00000577686 ALPK2Q86TB3 2170 aa12.3□□□□□ -0.44
SMARCD2-205ENST00000577686 SDHDO14521 159 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 LILRA1O75019 489 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 RAB36O95755 333 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 TFP02787 698 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 ADRA2AP08913 450 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 ALDOCP09972 364 aaKnown RBP12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 NQO1P15559 274 aaKnown RBP12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 ITGA2P17301 1181 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 GPR6P46095 362 aaPredicted RBP12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 VSNL1P62760 191 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 SRSF2Q01130 221 aaKnown RBP12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 HGFACQ04756 655 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 LGALS3BPQ08380 585 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 GSG1Q2KHT4 349 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 C6orf10Q5SRN2 563 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 GKAP1Q5VSY0 366 aaPredicted RBP12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 NXNQ6DKJ4 435 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 C6orf89Q6UWU4 347 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 RINLQ6ZS11 566 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 H1FNTQ75WM6 255 aaPredicted RBP12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 SERPINA11Q86U17 422 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 MDP1Q86V88 176 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 KRT73Q86Y46 540 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 UEVLDQ8IX04 471 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 ADPRHL1Q8NDY3 354 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 ZNF418Q8TF45 676 aaPredicted RBP12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 SLC38A5Q8WUX1 472 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 MRPL24Q96A35 216 aaKnown RBP12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 C1orf159Q96HA4 380 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 TEX37Q96LM6 180 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 SPATA5L1Q9BVQ7 753 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 ASPNQ9BXN1 380 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 CENPHQ9H3R5 247 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 NOX3Q9HBY0 568 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 ZIM2Q9NZV7 527 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 GPR160Q9UJ42 338 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 SLC13A4Q9UKG4 626 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 ZNF346Q9UL40 294 aaKnown RBP12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 POFUT2Q9Y2G5 429 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 CORINQ9Y5Q5 1042 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 GPR45Q9Y5Y3 372 aa12.29□□□□□ -0.44
SMARCD2-205ENST00000577686 HEATR1Q9H583 2144 aaKnown RBP12.28□□□□□ -0.44
SMARCD2-205ENST00000577686 TRAV36DV7A0A075B6V5 113 aa12.28□□□□□ -0.44
SMARCD2-205ENST00000577686 LOC102725191A0A1B0GVB3 256 aa12.28□□□□□ -0.44
SMARCD2-205ENST00000577686 FTCDNL1E5RQL4 147 aa12.28□□□□□ -0.44
SMARCD2-205ENST00000577686 CD79AP11912 226 aa12.28□□□□□ -0.44
SMARCD2-205ENST00000577686 NR4A1P22736 598 aa12.28□□□□□ -0.44
SMARCD2-205ENST00000577686 SELENOVP59797 346 aa12.28□□□□□ -0.44
SMARCD2-205ENST00000577686 FADDQ13158 208 aa12.28□□□□□ -0.44
SMARCD2-205ENST00000577686 RIN1Q13671 783 aa12.28□□□□□ -0.44
SMARCD2-205ENST00000577686 KRT80Q6KB66 452 aa12.28□□□□□ -0.44
SMARCD2-205ENST00000577686 LINGO2Q7L985 606 aa12.28□□□□□ -0.44
SMARCD2-205ENST00000577686 CLIP4Q8N3C7 705 aa12.28□□□□□ -0.44
SMARCD2-205ENST00000577686 AENQ8WTP8 325 aaKnown RBP12.28□□□□□ -0.44
SMARCD2-205ENST00000577686 ZNF416Q9BWM5 594 aa12.28□□□□□ -0.44
SMARCD2-205ENST00000577686 NELFAQ9H3P2 528 aa12.28□□□□□ -0.44
SMARCD2-205ENST00000577686 PNPOQ9NVS9 261 aa12.28□□□□□ -0.44
SMARCD2-205ENST00000577686 REV1Q9UBZ9 1251 aa12.28□□□□□ -0.44
SMARCD2-205ENST00000577686 ZNF726A6NNF4 738 aa12.27□□□□□ -0.45
SMARCD2-205ENST00000577686 M0R082 166 aa12.27□□□□□ -0.45
SMARCD2-205ENST00000577686 M0R3G1 203 aa12.27□□□□□ -0.45
SMARCD2-205ENST00000577686 UBL3O95164 117 aa12.27□□□□□ -0.45
SMARCD2-205ENST00000577686 CELA3BP08861 270 aa12.27□□□□□ -0.45
SMARCD2-205ENST00000577686 SAGP10523 405 aaPredicted RBP12.27□□□□□ -0.45
SMARCD2-205ENST00000577686 PRG2P13727 222 aa12.27□□□□□ -0.45
SMARCD2-205ENST00000577686 ACHEP22303 614 aa12.27□□□□□ -0.45
SMARCD2-205ENST00000577686 EPHA3P29320 983 aa12.27□□□□□ -0.45
SMARCD2-205ENST00000577686 IL12AP29459 219 aa12.27□□□□□ -0.45
SMARCD2-205ENST00000577686 PRKAR1BP31321 381 aa12.27□□□□□ -0.45
SMARCD2-205ENST00000577686 ACTG1P63261 375 aa12.27□□□□□ -0.45
SMARCD2-205ENST00000577686 BST1Q10588 318 aa12.27□□□□□ -0.45
SMARCD2-205ENST00000577686 CCNIQ14094 377 aa12.27□□□□□ -0.45
SMARCD2-205ENST00000577686 MMEL1Q495T6 779 aa12.27□□□□□ -0.45
SMARCD2-205ENST00000577686 RPS26P11Q5JNZ5 115 aaPredicted RBP12.27□□□□□ -0.45
SMARCD2-205ENST00000577686 CDK20Q8IZL9 346 aa12.27□□□□□ -0.45
SMARCD2-205ENST00000577686 KDM8Q8N371 416 aa12.27□□□□□ -0.45
SMARCD2-205ENST00000577686 MREGQ8N565 214 aa12.27□□□□□ -0.45
SMARCD2-205ENST00000577686 SCAIQ8N9R8 606 aa12.27□□□□□ -0.45
SMARCD2-205ENST00000577686 BHLHE22Q8NFJ8 381 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms