RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 NAA11Q9BSU3 229 aaPredicted RBP9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 UCK2Q9BZX2 261 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 TSPAN10Q9H1Z9 355 aaPredicted RBP9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 EXO5Q9H790 373 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 TMEM185BQ9H7F4 350 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 ZNF556Q9HAH1 456 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 SMURF2Q9HAU4 748 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 ENOPH1Q9UHY7 261 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 RASD1Q9Y272 281 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 IGKV3D-15A0A087WSY6 115 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 UNC119BA6NIH7 251 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 SAC3D1A6NKF1 404 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 LRRN3E7EW58 273 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 EI24O14681 340 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 CYTIPO60759 359 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 OPN1LWP04000 364 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 HIST1H2ABP04908 130 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 ENPP1P22413 925 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 TCEA1P23193 301 aaKnown RBP9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 PEX2P28328 305 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 GRPRP30550 384 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 NUP107P57740 925 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 CDK5Q00535 292 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 SLC17A1Q14916 467 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 TAF11Q15544 211 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 OR7A5Q15622 319 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 FBXW10Q5XX13 1052 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 NSUN5P2Q63ZY6 315 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 GTF2IRD2BQ6EKJ0 949 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 SMARCD3Q6STE5 483 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 ZNF620Q6ZNG0 422 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 HIST3H2AQ7L7L0 130 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 GTF2IRD2Q86UP8 949 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 ATG16L2Q8NAA4 619 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 ATP6V1C2Q8NEY4 427 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 HIST1H2ACQ93077 130 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 WNT2BQ93097 391 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 ZHX1-C8orf76Q96EF9 292 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 OXGR1Q96P68 337 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 TNFRSF13CQ96RJ3 184 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 TUBA1CQ9BQE3 449 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 ASPNQ9BXN1 380 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 GABARAPL3Q9BY60 117 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 SRXN1Q9BYN0 137 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 VCX3BQ9H321 246 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 MCCC2Q9HCC0 563 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 NRIP3Q9NQ35 241 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 PAPOLBQ9NRJ5 636 aaKnown RBP9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 B3GAT1Q9P2W7 334 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 CLCF1Q9UBD9 225 aa9.93□□□□□ -0.82
CDK5RAP3-204ENST00000577664 NPIPA2E9PIF3 369 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 NPIPA3F8WFD2 350 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 M0R082 166 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 KPNA4O00629 521 aaPredicted RBP9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 IMPA2O14732 288 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 ARPC3O15145 178 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 SMAD9O15198 467 aaKnown RBP9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 SLC16A6O15403 523 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 IDH3BO43837 385 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 CXCL13O43927 109 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 NDUFB2O95178 105 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 TXNDC12O95881 172 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 IGHMP01871 453 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 SAGP10523 405 aaPredicted RBP9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 POU2F1P14859 743 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 IGFBP5P24593 272 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 TIMP3P35625 211 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 GPR4P46093 362 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 EIF1AXP47813 144 aaKnown RBP9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 GIPRP48546 466 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 RAD23AP54725 363 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 OR2B6P58173 313 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 EFNB1P98172 346 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 HSF1Q00613 529 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 RBPJQ06330 500 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 RPL18Q07020 188 aaKnown RBP9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 PUDPQ08623 228 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 NPRL3Q12980 569 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 PMS2P3Q13401 168 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 RNPS1Q15287 305 aaKnown RBP9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 ANKRD34AQ69YU3 496 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 ABLIM2Q6H8Q1 611 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 DPY19L2P2Q6ZN68 376 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 KIF18BQ86Y91 864 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 DOLPP1Q86YN1 238 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 TGIF2LYQ8IUE0 185 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 TMEM99Q8N816 258 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 ZNF417Q8TAU3 575 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 MAGEE2Q8TD90 523 aaPredicted RBP9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 RNF128Q8TEB7 428 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 GTPBP3Q969Y2 492 aaKnown RBP9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 SLC25A36Q96CQ1 311 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 ZNF587Q96SQ5 575 aaPredicted RBP9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 GRIP2Q9C0E4 1043 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 ENKD1Q9H0I2 346 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 BCO1Q9HAY6 547 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 DLL4Q9NR61 685 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 GLRX2Q9NS18 164 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 KRT84Q9NSB2 600 aa9.92□□□□□ -0.82
CDK5RAP3-204ENST00000577664 PNPLA3Q9NST1 481 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms