RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 DHX57Q6P158 1386 aaKnown RBP1.23□□□□□ -2.21
TOP2A-202ENST00000577541 KIF16BQ96L93 1317 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 IGKV1D-13A0A0B4J2D9 117 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 A0A1W2PNV4 684 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 TMEM150BA6NC51 233 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 RBMY1BA6NDE4 496 aaKnown RBP1.23□□□□□ -2.21
TOP2A-202ENST00000577541 RBMY1EA6NEQ0 496 aaKnown RBP1.23□□□□□ -2.21
TOP2A-202ENST00000577541 HELTA6NFD8 242 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 TRIM64CA6NLI5 447 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 TMX2-CTNND1H3BSU7 103 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 SNX4O95219 450 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 OXSR1O95747 527 aaPredicted RBP1.23□□□□□ -2.21
TOP2A-202ENST00000577541 CST1P01037 141 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 RBMY1DP0C7P1 496 aaKnown RBP1.23□□□□□ -2.21
TOP2A-202ENST00000577541 UBTFL1P0CB47 393 aaPredicted RBP1.23□□□□□ -2.21
TOP2A-202ENST00000577541 RBMY1A1P0DJD3 496 aaKnown RBP1.23□□□□□ -2.21
TOP2A-202ENST00000577541 IGKV1-13P0DP09 117 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 RNH1P13489 461 aaKnown RBP1.23□□□□□ -2.21
TOP2A-202ENST00000577541 COX5AP20674 150 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 COX7A1P24310 79 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 LONP1P36776 959 aaKnown RBP1.23□□□□□ -2.21
TOP2A-202ENST00000577541 PRPHP41219 470 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 TDO2P48775 406 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 MNAT1P51948 309 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 CRISP3P54108 245 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 CSNK1G2P78368 415 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 BEX3Q00994 111 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 CSTF1Q05048 431 aaKnown RBP1.23□□□□□ -2.21
TOP2A-202ENST00000577541 FGL1Q08830 312 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 SLC10A7Q0GE19 358 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 CCDC173Q0VFZ6 552 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 OXA1LQ15070 435 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 ZNF77Q15935 545 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 EXOC3L2Q2M3D2 409 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 KCTD21Q4G0X4 260 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 C5orf47Q569G3 176 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 PAGE3Q5JUK9 113 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 C1orf146Q5VVC0 180 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 OR52E8Q6IFG1 317 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 C11orf71Q6IPW1 123 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 Q6ZSR3 168 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 ARCQ7LC44 396 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 NIPA1Q7RTP0 329 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 NLRP9Q7RTR0 991 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 EFL1Q7Z2Z2 1120 aaKnown RBP1.23□□□□□ -2.21
TOP2A-202ENST00000577541 SLC26A11Q86WA9 606 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 RDH10Q8IZV5 341 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 HSD17B11Q8NBQ5 300 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 BHLHE23Q8NDY6 225 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 NPBQ8NG41 125 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 ZNF596Q8TC21 504 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 GIMAP1Q8WWP7 306 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 ARPC1AQ92747 370 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 FBXO32Q969P5 355 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 TUBGCP3Q96CW5 907 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 PAGE5Q96GU1 130 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 TSNARE1Q96NA8 513 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 MYCBPQ99417 103 aaPredicted RBP1.23□□□□□ -2.21
TOP2A-202ENST00000577541 ZBTB18Q99592 522 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 GCOM2Q9BZD3 368 aaPredicted RBP1.23□□□□□ -2.21
TOP2A-202ENST00000577541 GPR61Q9BZJ8 451 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 ACTR6Q9GZN1 396 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 TPK1Q9H3S4 243 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 ANKRD19PQ9H560 264 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 LY9Q9HBG7 655 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 WFDC1Q9HC57 220 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 ZFP14Q9HCL3 533 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 AIG1Q9NVV5 245 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 MTRF1LQ9UGC7 380 aaKnown RBP1.23□□□□□ -2.21
TOP2A-202ENST00000577541 NUFIP1Q9UHK0 495 aaKnown RBP1.23□□□□□ -2.21
TOP2A-202ENST00000577541 OPN4Q9UHM6 478 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 HPCAL4Q9UM19 191 aa1.23□□□□□ -2.21
TOP2A-202ENST00000577541 RRP15Q9Y3B9 282 aaKnown RBP1.23□□□□□ -2.21
TOP2A-202ENST00000577541 CSDC2Q9Y534 153 aaKnown RBP1.23□□□□□ -2.21
TOP2A-202ENST00000577541 MTCL1Q9Y4B5 1905 aaKnown RBP1.23□□□□□ -2.21
TOP2A-202ENST00000577541 IGHV1OR21-1A0A087WYE8 117 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 OR52A4PA6NMU1 304 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 E9PBE3 544 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 HAS3O00219 553 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 UGT1A9O60656 530 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 UPK3AO75631 287 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 OR7A10O76100 309 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 AP2A1O95782 977 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 TSPAN13O95857 204 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 TSPAN12O95859 305 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 IGLV3-19P01714 112 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 P04436 131 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 LGALS2P05162 132 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 UQCRFS1P1P0C7P4 283 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 CHTF8P0CG12 524 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 FOLR1P15328 257 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 SHMT2P34897 504 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 RPL13AP40429 203 aaKnown RBP1.22□□□□□ -2.21
TOP2A-202ENST00000577541 VDAC2P45880 294 aaPredicted RBP1.22□□□□□ -2.21
TOP2A-202ENST00000577541 CCR6P51684 374 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 SH3BGRP55822 239 aaPredicted RBP1.22□□□□□ -2.21
TOP2A-202ENST00000577541 PRPS1P60891 318 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 GANABQ14697 944 aaKnown RBP1.22□□□□□ -2.21
TOP2A-202ENST00000577541 MRPL23Q16540 153 aaKnown RBP1.22□□□□□ -2.21
TOP2A-202ENST00000577541 ALKBH6Q3KRA9 238 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms