RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 C17orf78Q8N4C9 275 aa23.16■■□□□ 1.3
PPP4R1-204ENST00000577393 PIP5K1AQ99755 562 aa23.16■■□□□ 1.3
PPP4R1-204ENST00000577393 ALG2Q9H553 416 aa23.16■■□□□ 1.3
PPP4R1-204ENST00000577393 ARL2BPQ9Y2Y0 163 aa23.16■■□□□ 1.3
PPP4R1-204ENST00000577393 TEP1Q99973 2627 aaKnown RBP23.15■■□□□ 1.3
PPP4R1-204ENST00000577393 CXCR6O00574 342 aa23.15■■□□□ 1.3
PPP4R1-204ENST00000577393 KPNA4O00629 521 aaPredicted RBP23.15■■□□□ 1.3
PPP4R1-204ENST00000577393 NDUFAB1O14561 156 aa23.15■■□□□ 1.3
PPP4R1-204ENST00000577393 GSTA4O15217 222 aa23.15■■□□□ 1.3
PPP4R1-204ENST00000577393 SLC43A1O75387 559 aa23.15■■□□□ 1.3
PPP4R1-204ENST00000577393 OR5F1O95221 314 aa23.15■■□□□ 1.3
PPP4R1-204ENST00000577393 CH25HO95992 272 aa23.15■■□□□ 1.3
PPP4R1-204ENST00000577393 ZNF83P51522 516 aa23.15■■□□□ 1.3
PPP4R1-204ENST00000577393 PUDPQ08623 228 aa23.15■■□□□ 1.3
PPP4R1-204ENST00000577393 PIN1Q13526 163 aaPredicted RBP23.15■■□□□ 1.3
PPP4R1-204ENST00000577393 ZNF74Q16587 644 aa23.15■■□□□ 1.3
PPP4R1-204ENST00000577393 ZNF611Q8N823 705 aa23.15■■□□□ 1.3
PPP4R1-204ENST00000577393 OR5J2Q8NH18 312 aa23.15■■□□□ 1.3
PPP4R1-204ENST00000577393 NEUROG1Q92886 237 aa23.15■■□□□ 1.3
PPP4R1-204ENST00000577393 SLC19A3Q9BZV2 496 aa23.15■■□□□ 1.3
PPP4R1-204ENST00000577393 POLR2J2Q9GZM3 115 aaKnown RBP23.15■■□□□ 1.3
PPP4R1-204ENST00000577393 POLR2J3Q9H1A7 115 aaKnown RBP23.15■■□□□ 1.3
PPP4R1-204ENST00000577393 RIMS3Q9UJD0 308 aa23.15■■□□□ 1.3
PPP4R1-204ENST00000577393 ALPK2Q86TB3 2170 aa23.15■■□□□ 1.3
PPP4R1-204ENST00000577393 AKAP8O43823 692 aaKnown RBP23.14■■□□□ 1.29
PPP4R1-204ENST00000577393 AHCYP23526 432 aa23.14■■□□□ 1.29
PPP4R1-204ENST00000577393 SLC25A3Q00325 362 aa23.14■■□□□ 1.29
PPP4R1-204ENST00000577393 POU3F1Q03052 451 aaPredicted RBP23.14■■□□□ 1.29
PPP4R1-204ENST00000577393 NHLRC1Q6VVB1 395 aa23.14■■□□□ 1.29
PPP4R1-204ENST00000577393 NKAIN4Q8IVV8 208 aa23.14■■□□□ 1.29
PPP4R1-204ENST00000577393 KBTBD8Q8NFY9 601 aa23.14■■□□□ 1.29
PPP4R1-204ENST00000577393 LZICQ8WZA0 190 aa23.14■■□□□ 1.29
PPP4R1-204ENST00000577393 OR2M2Q96R28 347 aa23.14■■□□□ 1.29
PPP4R1-204ENST00000577393 C1QTNF6Q9BXI9 259 aa23.14■■□□□ 1.29
PPP4R1-204ENST00000577393 ABCD2Q9UBJ2 740 aa23.14■■□□□ 1.29
PPP4R1-204ENST00000577393 AMDHD2Q9Y303 409 aa23.14■■□□□ 1.29
PPP4R1-204ENST00000577393 SMPD2O60906 423 aa23.13■■□□□ 1.29
PPP4R1-204ENST00000577393 ROR2Q01974 943 aaKnown RBP23.13■■□□□ 1.29
PPP4R1-204ENST00000577393 HIKESHIQ53FT3 197 aa23.13■■□□□ 1.29
PPP4R1-204ENST00000577393 HMBOX1Q6NT76 420 aa23.13■■□□□ 1.29
PPP4R1-204ENST00000577393 KLHL17Q6TDP4 642 aa23.13■■□□□ 1.29
PPP4R1-204ENST00000577393 VTCN1Q7Z7D3 282 aa23.13■■□□□ 1.29
PPP4R1-204ENST00000577393 OR1K1Q8NGR3 316 aa23.13■■□□□ 1.29
PPP4R1-204ENST00000577393 BOD1Q96IK1 185 aa23.13■■□□□ 1.29
PPP4R1-204ENST00000577393 TXNDC15Q96J42 360 aa23.13■■□□□ 1.29
PPP4R1-204ENST00000577393 KCTD14Q9BQ13 255 aaPredicted RBP23.13■■□□□ 1.29
PPP4R1-204ENST00000577393 FKRPQ9H9S5 495 aa23.13■■□□□ 1.29
PPP4R1-204ENST00000577393 MEPEQ9NQ76 525 aaPredicted RBP23.13■■□□□ 1.29
PPP4R1-204ENST00000577393 NANSQ9NR45 359 aa23.13■■□□□ 1.29
PPP4R1-204ENST00000577393 NOX1Q9Y5S8 564 aa23.13■■□□□ 1.29
PPP4R1-204ENST00000577393 MED13LQ71F56 2210 aa23.13■■□□□ 1.29
PPP4R1-204ENST00000577393 ABCD4O14678 606 aa23.12■■□□□ 1.29
PPP4R1-204ENST00000577393 ADORA3P0DMS8 318 aa23.12■■□□□ 1.29
PPP4R1-204ENST00000577393 HOXC12P31275 282 aa23.12■■□□□ 1.29
PPP4R1-204ENST00000577393 PRPS1P60891 318 aa23.12■■□□□ 1.29
PPP4R1-204ENST00000577393 ADAM8P78325 824 aa23.12■■□□□ 1.29
PPP4R1-204ENST00000577393 FOXD4Q12950 439 aaPredicted RBP23.12■■□□□ 1.29
PPP4R1-204ENST00000577393 ZNF672Q499Z4 452 aaPredicted RBP23.12■■□□□ 1.29
PPP4R1-204ENST00000577393 TMEM108Q6UXF1 575 aa23.12■■□□□ 1.29
PPP4R1-204ENST00000577393 PXKQ7Z7A4 578 aa23.12■■□□□ 1.29
PPP4R1-204ENST00000577393 TGIF2LYQ8IUE0 185 aa23.12■■□□□ 1.29
PPP4R1-204ENST00000577393 TMEM123Q8N131 208 aa23.12■■□□□ 1.29
PPP4R1-204ENST00000577393 GPR137CQ8N3F9 429 aa23.12■■□□□ 1.29
PPP4R1-204ENST00000577393 LRRC17Q8N6Y2 441 aa23.12■■□□□ 1.29
PPP4R1-204ENST00000577393 PIK3C3Q8NEB9 887 aa23.12■■□□□ 1.29
PPP4R1-204ENST00000577393 TMEM255BQ8WV15 326 aa23.12■■□□□ 1.29
PPP4R1-204ENST00000577393 IGFBPL1Q8WX77 278 aa23.12■■□□□ 1.29
PPP4R1-204ENST00000577393 EMC6Q9BV81 110 aa23.12■■□□□ 1.29
PPP4R1-204ENST00000577393 MED29Q9NX70 200 aa23.12■■□□□ 1.29
PPP4R1-204ENST00000577393 ARID1AO14497 2285 aa23.12■■□□□ 1.29
PPP4R1-204ENST00000577393 SHISA9B4DS77 424 aa23.11■■□□□ 1.29
PPP4R1-204ENST00000577393 C11orf98E9PRG8 122 aa23.11■■□□□ 1.29
PPP4R1-204ENST00000577393 RPL36A-HNRNPH2H7BZ11 118 aa23.11■■□□□ 1.29
PPP4R1-204ENST00000577393 M0R1B8 84 aa23.11■■□□□ 1.29
PPP4R1-204ENST00000577393 OR6A2O95222 327 aa23.11■■□□□ 1.29
PPP4R1-204ENST00000577393 ZNF682O95780 498 aa23.11■■□□□ 1.29
PPP4R1-204ENST00000577393 THRBP10828 461 aa23.11■■□□□ 1.29
PPP4R1-204ENST00000577393 CD40P25942 277 aa23.11■■□□□ 1.29
PPP4R1-204ENST00000577393 RBM34P42696 430 aaKnown RBP23.11■■□□□ 1.29
PPP4R1-204ENST00000577393 UGT2B15P54855 530 aa23.11■■□□□ 1.29
PPP4R1-204ENST00000577393 TBRG1Q3YBR2 411 aa23.11■■□□□ 1.29
PPP4R1-204ENST00000577393 CARD17Q5XLA6 110 aa23.11■■□□□ 1.29
PPP4R1-204ENST00000577393 KLHL24Q6TFL4 600 aa23.11■■□□□ 1.29
PPP4R1-204ENST00000577393 CBLL1Q75N03 491 aa23.11■■□□□ 1.29
PPP4R1-204ENST00000577393 BCL2L2Q92843 193 aaPredicted RBP23.11■■□□□ 1.29
PPP4R1-204ENST00000577393 FBXW5Q969U6 566 aa23.11■■□□□ 1.29
PPP4R1-204ENST00000577393 LRRC37BQ96QE4 947 aa23.11■■□□□ 1.29
PPP4R1-204ENST00000577393 GPR35Q9HC97 309 aa23.11■■□□□ 1.29
PPP4R1-204ENST00000577393 SPAG4Q9NPE6 437 aa23.11■■□□□ 1.29
PPP4R1-204ENST00000577393 TAS2R5Q9NYW4 299 aa23.11■■□□□ 1.29
PPP4R1-204ENST00000577393 ZNF229Q9UJW7 825 aa23.11■■□□□ 1.29
PPP4R1-204ENST00000577393 SLC35F4A4IF30 521 aa23.1■■□□□ 1.29
PPP4R1-204ENST00000577393 SERPINI2O75830 405 aa23.1■■□□□ 1.29
PPP4R1-204ENST00000577393 SERPINA1P01009 418 aa23.1■■□□□ 1.29
PPP4R1-204ENST00000577393 MT-ND1P03886 318 aa23.1■■□□□ 1.29
PPP4R1-204ENST00000577393 HIST1H2ABP04908 130 aa23.1■■□□□ 1.29
PPP4R1-204ENST00000577393 NCK1P16333 377 aa23.1■■□□□ 1.29
PPP4R1-204ENST00000577393 PTAFRP25105 342 aa23.1■■□□□ 1.29
PPP4R1-204ENST00000577393 NKX6-1P78426 367 aaPredicted RBP23.1■■□□□ 1.29
PPP4R1-204ENST00000577393 ZP4Q12836 540 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms