RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 ADPRHL2Q9NX46 363 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 KLHL28Q9NXS3 571 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 GALNT8Q9NY28 637 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 RHCGQ9UBD6 479 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 SLC7A7Q9UM01 511 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 TRAPPC4Q9Y296 219 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 TMA7Q9Y2S6 64 aaKnown RBP8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 AP3M1Q9Y2T2 418 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 SPIN1Q9Y657 262 aaPredicted RBP8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 V9GYQ6 96 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 CHP2O43745 196 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 PIP5K1CO60331 668 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 PRKD3O94806 890 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 DIRAS1O95057 198 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 HPRP00739 348 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 CRHP06850 196 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 PNMTP11086 282 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 FCGR2AP12318 317 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 FUT1P19526 365 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 UQCRC1P31930 480 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 ASCL1P50553 236 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 UGT2B15P54855 530 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 FOXG1P55316 489 aaPredicted RBP8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 NCALDP61601 193 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 CSNK2A1P68400 391 aaPredicted RBP8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 VLDLRP98155 873 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 RASGEF1BQ0VAM2 473 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 SAMD4BQ5PRF9 694 aaKnown RBP8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 PDSS1Q5T2R2 415 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 OR2A2Q6IF42 318 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 ZNF613Q6PF04 617 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 C16orf89Q6UX73 402 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 NHLRC1Q6VVB1 395 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 MEX3DQ86XN8 651 aaKnown RBP8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 LRRC17Q8N6Y2 441 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 PFN4Q8NHR9 129 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 DNAJA4Q8WW22 397 aaPredicted RBP8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 PROX1Q92786 737 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 FAM162AQ96A26 154 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 SLC25A36Q96CQ1 311 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 SLC47A1Q96FL8 570 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 SLC41A3Q96GZ6 507 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 ZFP3Q96NJ6 502 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 ZNF385AQ96PM9 386 aaKnown RBP8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 TMEM27Q9HBJ8 222 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 PAQR5Q9NXK6 330 aaPredicted RBP8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 B3GAT1Q9P2W7 334 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 RPS6KB2Q9UBS0 482 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 PRSS50Q9UI38 385 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 RIMS3Q9UJD0 308 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 SLC13A4Q9UKG4 626 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 BAG5Q9UL15 447 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 ABCA12Q86UK0 2595 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 CACNA1CQ13936 2221 aa8.38□□□□□ -1.07
NPLOC4-219ENST00000576713 OTOGQ6ZRI0 2925 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 TRAV36DV7A0A075B6V5 113 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 IGKV3D-15A0A087WSY6 115 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 TCRBV5S2A0A599 114 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 TRAPPC13A5PLN9 417 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 AQP7P3A6NL99 342 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 hCG_2039718K7EN88 272 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 KPNA4O00629 521 aaPredicted RBP8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 AHSA1O95433 338 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 PLGP00747 810 aaPredicted RBP8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 IGHV3-9P01782 118 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 HPXP02790 462 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 YES1P07947 543 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 HLA-DOBP13765 273 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 GRPRP30550 384 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 MAP2K6P52564 334 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 SLC16A1P53985 500 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 SLC35A1P78382 337 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 LGALS3BPQ08380 585 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 BNIP1Q12981 228 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 SLC17A1Q14916 467 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 RNPS1Q15287 305 aaKnown RBP8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 TESK1Q15569 626 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 TSC22D1Q15714 1073 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 EXOC3L2Q2M3D2 409 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 IFI44LQ53G44 452 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 OTUD3Q5T2D3 398 aaPredicted RBP8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 PAQR6Q6TCH4 344 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 TFAP2EQ6VUC0 442 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 MEX3BQ6ZN04 569 aaKnown RBP8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 SLC46A3Q7Z3Q1 461 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 OR6K3Q8NGY3 331 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 MFSD8Q8NHS3 518 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 RASSF5Q8WWW0 418 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 RNASE6Q93091 150 aaKnown RBP8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 TMEM43Q9BTV4 400 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 RBM24Q9BX46 236 aaKnown RBP8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 GORASP2Q9H8Y8 452 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 TIGARQ9NQ88 270 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 PLSCR4Q9NRQ2 329 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 C20orf141Q9NUB4 165 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 NDUFAF4Q9P032 175 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 TMEFF2Q9UIK5 374 aaPredicted RBP8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 SLC9A8Q9Y2E8 581 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 FLVCR1Q9Y5Y0 555 aa8.37□□□□□ -1.07
NPLOC4-219ENST00000576713 NAV2Q8IVL1 2488 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms