RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 SMSP52788 366 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 SLC16A1P53985 500 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 IL1RL1Q01638 556 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 PUDPQ08623 228 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 ZP4Q12836 540 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 FHL1Q13642 323 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 C1DQ13901 141 aaKnown RBP7.61□□□□□ -1.19
NUP88-211ENST00000575976 GK3PQ14409 553 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 POU4F3Q15319 338 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 CDSNQ15517 529 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 ANKRD34AQ69YU3 496 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 VWA1Q6PCB0 445 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 CREB3L2Q70SY1 520 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 FAM214BQ7L5A3 538 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 BTLAQ7Z6A9 289 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 MRGPRGQ86SM5 289 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 OAFQ86UD1 273 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 EPHX4Q8IUS5 362 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 LINC00471Q8N535 108 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 ZIC4Q8N9L1 334 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 AQP11Q8NBQ7 271 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 OR9K2Q8NGE7 335 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 MOSPD2Q8NHP6 518 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 GIPC3Q8TF64 312 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 STMN2Q93045 179 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 STARD4Q96DR4 205 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 ZNF385AQ96PM9 386 aaKnown RBP7.61□□□□□ -1.19
NUP88-211ENST00000575976 TACO1Q9BSH4 297 aaKnown RBP7.61□□□□□ -1.19
NUP88-211ENST00000575976 BDH2Q9BUT1 245 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 SEMA6AQ9H2E6 1030 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 GP6Q9HCN6 339 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 KRCC1Q9NPI7 259 aaPredicted RBP7.61□□□□□ -1.19
NUP88-211ENST00000575976 FANCFQ9NPI8 374 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 COQ3Q9NZJ6 369 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 PDP1Q9P0J1 537 aaPredicted RBP7.61□□□□□ -1.19
NUP88-211ENST00000575976 ZNF629Q9UEG4 869 aaPredicted RBP7.61□□□□□ -1.19
NUP88-211ENST00000575976 HIF3AQ9Y2N7 669 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 NOSIPQ9Y314 301 aaKnown RBP7.61□□□□□ -1.19
NUP88-211ENST00000575976 EMC9Q9Y3B6 208 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 MAGED1Q9Y5V3 778 aaPredicted RBP7.61□□□□□ -1.19
NUP88-211ENST00000575976 FLVCR1Q9Y5Y0 555 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 MPDZO75970 2070 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 PHF3Q92576 2039 aaKnown RBP7.61□□□□□ -1.19
NUP88-211ENST00000575976 ARHGAP21Q5T5U3 1957 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 ITPR2Q14571 2701 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 WIPF3A6NGB9 483 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 UNC119BA6NIH7 251 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 GPR171O14626 319 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 RNF13O43567 381 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 TRAF3IP2O43734 574 aaPredicted RBP7.6□□□□□ -1.19
NUP88-211ENST00000575976 PTP4A3O75365 173 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 SERPINI2O75830 405 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 SMNDC1O75940 238 aaKnown RBP eCLIP7.6□□□□□ -1.19
NUP88-211ENST00000575976 AGFG2O95081 481 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 BAG2O95816 211 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 CGAP01215 116 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 F13BP05160 661 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 ZNF26P17031 533 aaPredicted RBP7.6□□□□□ -1.19
NUP88-211ENST00000575976 ZNF43P17038 809 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 BMP5P22003 454 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 FPR3P25089 353 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 EDNRAP25101 427 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 CHRNB4P30926 498 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 UQCRC1P31930 480 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 OPRM1P35372 400 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 ARHGDIAP52565 204 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 CLDN17P56750 224 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 RPS4XP62701 263 aaKnown RBP7.6□□□□□ -1.19
NUP88-211ENST00000575976 ELF3P78545 371 aaPredicted RBP7.6□□□□□ -1.19
NUP88-211ENST00000575976 POU3F1Q03052 451 aaPredicted RBP7.6□□□□□ -1.19
NUP88-211ENST00000575976 RPL18Q07020 188 aaKnown RBP7.6□□□□□ -1.19
NUP88-211ENST00000575976 TSPAN31Q12999 210 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 ZBED5Q49AG3 693 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 EEF1A1P5Q5VTE0 462 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 SHQ1Q6PI26 577 aaKnown RBP7.6□□□□□ -1.19
NUP88-211ENST00000575976 XKRXQ6PP77 449 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 NHLRC1Q6VVB1 395 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.6□□□□□ -1.19
NUP88-211ENST00000575976 PXKQ7Z7A4 578 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 GALNT5Q7Z7M9 940 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 IGFN1Q86VF2 1251 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 UEVLDQ8IX04 471 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 ZNF808Q8N4W9 903 aaPredicted RBP7.6□□□□□ -1.19
NUP88-211ENST00000575976 ZNF610Q8N9Z0 462 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 LRRC75AQ8NAA5 344 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 RELL2Q8NC24 303 aaPredicted RBP7.6□□□□□ -1.19
NUP88-211ENST00000575976 ICA1LQ8NDH6 482 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 OR6K3Q8NGY3 331 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 OR5K1Q8NHB7 308 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 ITLN2Q8WWU7 325 aaPredicted RBP7.6□□□□□ -1.19
NUP88-211ENST00000575976 ASB5Q8WWX0 329 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 GTPBP3Q969Y2 492 aaKnown RBP7.6□□□□□ -1.19
NUP88-211ENST00000575976 NRBF2Q96F24 287 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 CENPNQ96H22 339 aaPredicted RBP7.6□□□□□ -1.19
NUP88-211ENST00000575976 TXNDC15Q96J42 360 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 FEVQ99581 238 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 NIPSNAP1Q9BPW8 284 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 SFXN3Q9BWM7 321 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 UCK2Q9BZX2 261 aa7.6□□□□□ -1.19
NUP88-211ENST00000575976 ENKD1Q9H0I2 346 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms