RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 FANCFQ9NPI8 374 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 KCNJ16Q9NPI9 418 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 PLSCR4Q9NRQ2 329 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 TAS2R5Q9NYW4 299 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 HIF3AQ9Y2N7 669 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 TRAV27A0A087WT01 109 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 CDC42EP2O14613 210 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 MSTNO14793 375 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 ENTPD5O75356 428 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 SERPINI2O75830 405 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 HPRP00739 348 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 CGAP01215 116 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 UQCRC1P31930 480 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 AQP2P41181 271 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 ASCL1P50553 236 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 ARHGDIAP52565 204 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 IST1P53990 364 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 CLDN17P56750 224 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 RPS4XP62701 263 aaKnown RBP12.41□□□□□ -0.42
RPAIN-217ENST00000575711 LAPTM4AQ15012 233 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 CDSNQ15517 529 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 TAF11Q15544 211 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 ATP6AP1Q15904 470 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 C1orf94Q6P1W5 598 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 PGBD2Q6P3X8 592 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 AAED1Q7RTV5 226 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 LUZP2Q86TE4 346 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 EPHX4Q8IUS5 362 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 ZNF100Q8IYN0 542 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 OR10G2Q8NGC3 310 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 OR9Q2Q8NGE9 314 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 OR51A7Q8NH64 312 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 GIPC3Q8TF64 312 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 APH1AQ96BI3 265 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 LRRC46Q96FV0 321 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 ZNF385AQ96PM9 386 aaKnown RBP12.41□□□□□ -0.42
RPAIN-217ENST00000575711 BDH2Q9BUT1 245 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 NDEL1Q9GZM8 345 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 OPN3Q9H1Y3 402 aaPredicted RBP12.41□□□□□ -0.42
RPAIN-217ENST00000575711 PARPBPQ9NWS1 579 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 METRNQ9UJH8 293 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 DOCK7Q96N67 2140 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 MPDZO75970 2070 aa12.41□□□□□ -0.42
RPAIN-217ENST00000575711 UBR5O95071 2799 aaPredicted RBP12.41□□□□□ -0.42
RPAIN-217ENST00000575711 HIVEP3Q5T1R4 2406 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 NKX2-6A6NCS4 301 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 ARRDC5A6NEK1 342 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 UNC119BA6NIH7 251 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 TRAF3IP2O43734 574 aaPredicted RBP12.4□□□□□ -0.42
RPAIN-217ENST00000575711 TSPAN19P0C672 248 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 HLA-DOBP13765 273 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 FPR3P25089 353 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 OR3A2P47893 321 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 PRPS1P60891 318 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 ZBED5Q49AG3 693 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 ALG10Q5BKT4 473 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 NIPAL3Q6P499 406 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 TFAP2EQ6VUC0 442 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 ZIC4Q8N9L1 334 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 ZNF610Q8N9Z0 462 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 AQP11Q8NBQ7 271 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 MOSPD2Q8NHP6 518 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 LRTOMTQ8WZ04 291 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 STMN2Q93045 179 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 TNFRSF13CQ96RJ3 184 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 INIPQ9NRY2 104 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 JKAMPQ9P055 326 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 PDP1Q9P0J1 537 aaPredicted RBP12.4□□□□□ -0.42
RPAIN-217ENST00000575711 MGAT4BQ9UQ53 548 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 RCE1Q9Y256 329 aa12.4□□□□□ -0.42
RPAIN-217ENST00000575711 NCOA6Q14686 2063 aaPredicted RBP12.4□□□□□ -0.42
RPAIN-217ENST00000575711 A0A1W2PRG6 482 aa12.39□□□□□ -0.43
RPAIN-217ENST00000575711 A8MXE2 369 aa12.39□□□□□ -0.43
RPAIN-217ENST00000575711 KLF4O43474 513 aa12.39□□□□□ -0.43
RPAIN-217ENST00000575711 GASTP01350 101 aa12.39□□□□□ -0.43
RPAIN-217ENST00000575711 F13BP05160 661 aa12.39□□□□□ -0.43
RPAIN-217ENST00000575711 IFNGR1P15260 489 aa12.39□□□□□ -0.43
RPAIN-217ENST00000575711 TSPAN31Q12999 210 aa12.39□□□□□ -0.43
RPAIN-217ENST00000575711 ZNF770Q6IQ21 691 aaPredicted RBP12.39□□□□□ -0.43
RPAIN-217ENST00000575711 SHQ1Q6PI26 577 aaKnown RBP12.39□□□□□ -0.43
RPAIN-217ENST00000575711 BEND4Q6ZU67 534 aa12.39□□□□□ -0.43
RPAIN-217ENST00000575711 SLC35D2Q76EJ3 337 aa12.39□□□□□ -0.43
RPAIN-217ENST00000575711 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.39□□□□□ -0.43
RPAIN-217ENST00000575711 TMEM179BQ7Z7N9 219 aa12.39□□□□□ -0.43
RPAIN-217ENST00000575711 AMIGO2Q86SJ2 522 aa12.39□□□□□ -0.43
RPAIN-217ENST00000575711 OR5K1Q8NHB7 308 aa12.39□□□□□ -0.43
RPAIN-217ENST00000575711 NRBF2Q96F24 287 aa12.39□□□□□ -0.43
RPAIN-217ENST00000575711 MS4A3Q96HJ5 214 aa12.39□□□□□ -0.43
RPAIN-217ENST00000575711 GPA33Q99795 319 aa12.39□□□□□ -0.43
RPAIN-217ENST00000575711 RBM24Q9BX46 236 aaKnown RBP12.39□□□□□ -0.43
RPAIN-217ENST00000575711 NTN4Q9HB63 628 aa12.39□□□□□ -0.43
RPAIN-217ENST00000575711 MCCC2Q9HCC0 563 aa12.39□□□□□ -0.43
RPAIN-217ENST00000575711 S100A14Q9HCY8 104 aa12.39□□□□□ -0.43
RPAIN-217ENST00000575711 MED12LQ86YW9 2145 aa12.38□□□□□ -0.43
RPAIN-217ENST00000575711 OR6C65A6NJZ3 312 aa12.38□□□□□ -0.43
RPAIN-217ENST00000575711 ZNF726A6NNF4 738 aa12.38□□□□□ -0.43
RPAIN-217ENST00000575711 MCIDASD6RGH6 385 aa12.38□□□□□ -0.43
RPAIN-217ENST00000575711 H3BNX3 289 aa12.38□□□□□ -0.43
RPAIN-217ENST00000575711 PTP4A3O75365 173 aa12.38□□□□□ -0.43
RPAIN-217ENST00000575711 NDUFB2O95178 105 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms