RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 PRRG3Q9BZD7 231 aa9.46□□□□□ -0.9
LITAF-216ENST00000574848 CXorf56Q9H5V9 222 aa9.46□□□□□ -0.9
LITAF-216ENST00000574848 ELOVL5Q9NYP7 299 aa9.46□□□□□ -0.9
LITAF-216ENST00000574848 ITGB1BP2Q9UKP3 347 aa9.46□□□□□ -0.9
LITAF-216ENST00000574848 PRRC2AP48634 2157 aaKnown RBP9.46□□□□□ -0.9
LITAF-216ENST00000574848 NPIPA5A0A0B4J1W7 369 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 AGAP5A6NIR3 686 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 NPIPA7E9PJI5 369 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 M0R3H8 397 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 GMFGO60234 142 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 EIF4E2O60573 245 aaKnown RBP9.45□□□□□ -0.9
LITAF-216ENST00000574848 FMO6PO60774 539 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 NPIPA8P0DM63 369 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 UBL4AP11441 157 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 OSMP13725 252 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 PRKCAP17252 672 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 IL11P20809 199 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 RPS4Y1P22090 263 aaKnown RBP9.45□□□□□ -0.9
LITAF-216ENST00000574848 EIF1AXP47813 144 aaKnown RBP9.45□□□□□ -0.9
LITAF-216ENST00000574848 SLC6A8P48029 635 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 ALDH3B2P48448 385 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 MVKQ03426 396 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 SKP2Q13309 424 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 CDK5R2Q13319 367 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 GPR68Q15743 365 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 PLEKHM3Q6ZWE6 761 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 ALDH16A1Q8IZ83 802 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 CNEP1R1Q8N9A8 125 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 FAM71CQ8NEG0 241 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 OR9Q2Q8NGE9 314 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 OR6T1Q8NGN1 323 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 FAM81AQ8TBF8 368 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 PHOSPHO1Q8TCT1 267 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 RNF128Q8TEB7 428 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 SLC35B4Q969S0 331 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 MRGPRX4Q96LA9 322 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 KLHL15Q96M94 604 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 TSC22D3Q99576 134 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 TEX12Q9BXU0 123 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 PLEKHF2Q9H8W4 249 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 GLRX2Q9NS18 164 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 RHCGQ9UBD6 479 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 TESQ9UGI8 421 aaKnown RBP9.45□□□□□ -0.9
LITAF-216ENST00000574848 KCNE5Q9UJ90 142 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 MKLN1Q9UL63 735 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 MCTS1Q9ULC4 181 aaKnown RBP9.45□□□□□ -0.9
LITAF-216ENST00000574848 A4GNTQ9UNA3 340 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 EDARQ9UNE0 448 aa9.45□□□□□ -0.9
LITAF-216ENST00000574848 A0A0J9YW62 118 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 TRBV4-1A0A0J9YWV2 114 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 SH3PXD2BA1X283 911 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 SERINC4A6NH21 518 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 ZNF701M0R085 212 aaPredicted RBP9.44□□□□□ -0.9
LITAF-216ENST00000574848 FFAR1O14842 300 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 ZNF264O43296 627 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 CXCL13O43927 109 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 JUNBP17275 347 aaPredicted RBP9.44□□□□□ -0.9
LITAF-216ENST00000574848 UGT2B10P36537 528 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 ART1P52961 327 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 CRISP1P54107 249 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 SIRPAP78324 504 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 SELENBP1Q13228 472 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 MAD2L1BPQ15013 274 aaPredicted RBP9.44□□□□□ -0.9
LITAF-216ENST00000574848 SGCBQ16585 318 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 ZNF239Q16600 458 aaKnown RBP9.44□□□□□ -0.9
LITAF-216ENST00000574848 ZBED5Q49AG3 693 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 PDSS1Q5T2R2 415 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 PDZK1Q5T2W1 519 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 ANKRD34AQ69YU3 496 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 CD300LDQ6UXZ3 194 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 ZNF836Q6ZNA1 936 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 VRK2Q86Y07 508 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 CMIPQ8IY22 773 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 BPIFB6Q8NFQ5 453 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 OR5W2Q8NH69 310 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 ZNF420Q8TAQ5 688 aaPredicted RBP9.44□□□□□ -0.9
LITAF-216ENST00000574848 PIGXQ8TBF5 258 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 GNPDA2Q8TDQ7 276 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 GPR119Q8TDV5 335 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 GTPBP3Q969Y2 492 aaKnown RBP9.44□□□□□ -0.9
LITAF-216ENST00000574848 CPNE4Q96A23 557 aaPredicted RBP9.44□□□□□ -0.9
LITAF-216ENST00000574848 Q96MT0 163 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 MCHR1Q99705 422 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 NIPSNAP1Q9BPW8 284 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 OPN3Q9H1Y3 402 aaPredicted RBP9.44□□□□□ -0.9
LITAF-216ENST00000574848 LIME1Q9H400 295 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 GP6Q9HCN6 339 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 PLSCR4Q9NRQ2 329 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 NDRG3Q9UGV2 375 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 PROCRQ9UNN8 238 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 CARD8Q9Y2G2 431 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 EMC9Q9Y3B6 208 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 COMMD3-BMI1R4GMX3 469 aa9.44□□□□□ -0.9
LITAF-216ENST00000574848 MPDZO75970 2070 aa9.43□□□□□ -0.9
LITAF-216ENST00000574848 HEATR5AQ86XA9 2040 aa9.43□□□□□ -0.9
LITAF-216ENST00000574848 RAI1Q7Z5J4 1906 aaPredicted RBP9.43□□□□□ -0.9
LITAF-216ENST00000574848 CENPVL1A0A0U1RR11 272 aa9.43□□□□□ -0.9
LITAF-216ENST00000574848 A0A1W2PPR1 153 aa9.43□□□□□ -0.9
LITAF-216ENST00000574848 TRAPPC13A5PLN9 417 aa9.43□□□□□ -0.9
LITAF-216ENST00000574848 GJE1A6NN92 205 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms