RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 SGK3Q96BR1 496 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 PPP1R16AQ96I34 528 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 TEAD3Q99594 435 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 TGIF2Q9GZN2 237 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 SMCO4Q9NRQ5 59 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 SHPKQ9UHJ6 478 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 KCNK7Q9Y2U2 307 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 FAM96BQ9Y3D0 163 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 RFPL4AA6NLU0 287 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 RFPL4AL1F8VTS6 287 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 K7ESM1 405 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 GATCO43716 136 aaKnown RBP8.81□□□□□ -1
CCDC40-212ENST00000574799 DCNP07585 359 aaKnown RBP8.81□□□□□ -1
CCDC40-212ENST00000574799 SRMP19623 302 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 POU4F2Q12837 409 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 NKPD1Q17RQ9 610 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 PRRT3Q5FWE3 981 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 ELFN2Q5R3F8 820 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 RANBP3LQ86VV4 465 aaPredicted RBP8.81□□□□□ -1
CCDC40-212ENST00000574799 C10orf53Q8N6V4 93 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 OR4C16Q8NGL9 310 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 NKD1Q969G9 470 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 RELTQ969Z4 430 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 RSRP1Q9BUV0 290 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 PAPOLGQ9BWT3 736 aaKnown RBP8.81□□□□□ -1
CCDC40-212ENST00000574799 C1QTNF2Q9BXJ5 285 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 POTEKPQ9BYX7 375 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 TLNRD1Q9H1K6 362 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 TRAV27A0A087WT01 109 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 OR6C65A6NJZ3 312 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 H7BY64 318 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 PLPP2O43688 288 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 ZNF432O94892 652 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 CHRM4P08173 479 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 VSIG10L2P0DP72 767 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 RPA2P15927 270 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 TAS2R20P59543 309 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 ACSM1Q08AH1 577 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 SSX2Q16385 188 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 C2orf68Q2NKX9 166 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 FOXRED2Q8IWF2 684 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 EIF4E3Q8N5X7 224 aaKnown RBP8.81□□□□□ -1
CCDC40-212ENST00000574799 OR52E2Q8NGJ4 325 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 OR9A1PQ8NGU1 263 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 TIFAQ96CG3 184 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 WBP1Q96G27 269 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 HS6ST2Q96MM7 605 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 PRAP1Q96NZ9 151 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 LGR4Q9BXB1 951 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 CHRDQ9H2X0 955 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 MAN2C1Q9NTJ4 1040 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 TAS2R8Q9NYW2 309 aa8.81□□□□□ -1
CCDC40-212ENST00000574799 EXOGQ9Y2C4 368 aaKnown RBP8.81□□□□□ -1
CCDC40-212ENST00000574799 KLF2Q9Y5W3 355 aaPredicted RBP8.81□□□□□ -1
CCDC40-212ENST00000574799 TMEM82A0PJX8 343 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 OR2M5A3KFT3 312 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 EIF1BO60739 113 aaKnown RBP8.8□□□□□ -1
CCDC40-212ENST00000574799 PRKRAO75569 313 aaKnown RBP8.8□□□□□ -1
CCDC40-212ENST00000574799 OR2A4O95047 310 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 RAB3DO95716 219 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 HLA-AP01891 365 aaKnown RBP8.8□□□□□ -1
CCDC40-212ENST00000574799 GKN3PP0CG01 181 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 AKAIN1P0CW23 69 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 NPPBP16860 134 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 SPI1P17947 270 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 ITGA3P26006 1051 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 SDHAP31040 664 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 EIF1P41567 113 aaKnown RBP8.8□□□□□ -1
CCDC40-212ENST00000574799 VASPP50552 380 aaPredicted RBP8.8□□□□□ -1
CCDC40-212ENST00000574799 SSTP61278 116 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 PPIAP62937 165 aaKnown RBP8.8□□□□□ -1
CCDC40-212ENST00000574799 SIRPAP78324 504 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 PON3Q15166 354 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 PRSS53Q2L4Q9 553 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 UQCC3Q6UW78 93 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 GDPD4Q6W3E5 623 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 DCUN1D4Q92564 292 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 ARSGQ96EG1 525 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 OR2A7Q96R45 310 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 NRTNQ99748 197 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 SSX3Q99909 188 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 GPR174Q9BXC1 333 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 PBX4Q9BYU1 374 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 OR51M1Q9H341 326 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 SLC25A13Q9UJS0 675 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 GXYLT2A0PJZ3 443 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 OR2W5A6NFC9 320 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 IFITM5A6NNB3 132 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 FOXE1O00358 373 aaPredicted RBP8.8□□□□□ -1
CCDC40-212ENST00000574799 GSTZ1O43708 216 aaPredicted RBP8.8□□□□□ -1
CCDC40-212ENST00000574799 RAB40ALP0C0E4 278 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 TPT1P13693 172 aaKnown RBP8.8□□□□□ -1
CCDC40-212ENST00000574799 PRSS3P35030 304 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 VIPR2P41587 438 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 CLDN2P57739 230 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 PDE7AQ13946 482 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 FNDC3BQ53EP0 1204 aaKnown RBP8.8□□□□□ -1
CCDC40-212ENST00000574799 KHDRBS2Q5VWX1 349 aaKnown RBP8.8□□□□□ -1
CCDC40-212ENST00000574799 COMTD1Q86VU5 262 aa8.8□□□□□ -1
CCDC40-212ENST00000574799 ZNF227Q86WZ6 799 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms