RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 CA10Q9NS85 328 aa18.39■□□□□ 0.53
CHRNB1-206ENST00000574054 ARFGEF3Q5TH69 2177 aa18.39■□□□□ 0.53
CHRNB1-206ENST00000574054 AKAP8O43823 692 aaKnown RBP18.38■□□□□ 0.53
CHRNB1-206ENST00000574054 ZNF432O94892 652 aa18.38■□□□□ 0.53
CHRNB1-206ENST00000574054 NQO1P15559 274 aaKnown RBP18.38■□□□□ 0.53
CHRNB1-206ENST00000574054 USF1P22415 310 aaPredicted RBP18.38■□□□□ 0.53
CHRNB1-206ENST00000574054 SLC6A2P23975 617 aa18.38■□□□□ 0.53
CHRNB1-206ENST00000574054 PDLIM4P50479 330 aa18.38■□□□□ 0.53
CHRNB1-206ENST00000574054 RGS8P57771 180 aaPredicted RBP18.38■□□□□ 0.53
CHRNB1-206ENST00000574054 ANKS4BQ8N8V4 417 aa18.38■□□□□ 0.53
CHRNB1-206ENST00000574054 PROX1Q92786 737 aa18.38■□□□□ 0.53
CHRNB1-206ENST00000574054 SORCS2Q96PQ0 1159 aa18.38■□□□□ 0.53
CHRNB1-206ENST00000574054 KCNK17Q96T54 332 aa18.38■□□□□ 0.53
CHRNB1-206ENST00000574054 NELFAQ9H3P2 528 aa18.38■□□□□ 0.53
CHRNB1-206ENST00000574054 IKZF5Q9H5V7 419 aa18.38■□□□□ 0.53
CHRNB1-206ENST00000574054 TMEM27Q9HBJ8 222 aa18.38■□□□□ 0.53
CHRNB1-206ENST00000574054 CRLF2Q9HC73 371 aa18.38■□□□□ 0.53
CHRNB1-206ENST00000574054 MOV10Q9HCE1 1003 aaKnown RBP18.38■□□□□ 0.53
CHRNB1-206ENST00000574054 KLHL14Q9P2G3 628 aa18.38■□□□□ 0.53
CHRNB1-206ENST00000574054 CRNNQ9UBG3 495 aaPredicted RBP18.38■□□□□ 0.53
CHRNB1-206ENST00000574054 TESQ9UGI8 421 aaKnown RBP18.38■□□□□ 0.53
CHRNB1-206ENST00000574054 CORO2BQ9UQ03 480 aa18.38■□□□□ 0.53
CHRNB1-206ENST00000574054 PRORSD1PA6NEY8 169 aa18.37■□□□□ 0.53
CHRNB1-206ENST00000574054 EVPLLA8MZ36 301 aa18.37■□□□□ 0.53
CHRNB1-206ENST00000574054 RPL36A-HNRNPH2H7BZ11 118 aa18.37■□□□□ 0.53
CHRNB1-206ENST00000574054 CELA3BP08861 270 aa18.37■□□□□ 0.53
CHRNB1-206ENST00000574054 OR4A8P0C604 315 aa18.37■□□□□ 0.53
CHRNB1-206ENST00000574054 HOXB1P14653 301 aaPredicted RBP18.37■□□□□ 0.53
CHRNB1-206ENST00000574054 CAPZA2P47755 286 aa18.37■□□□□ 0.53
CHRNB1-206ENST00000574054 IDH3GP51553 393 aaPredicted RBP18.37■□□□□ 0.53
CHRNB1-206ENST00000574054 GGTLC2Q14390 218 aa18.37■□□□□ 0.53
CHRNB1-206ENST00000574054 CEACAM16Q2WEN9 425 aa18.37■□□□□ 0.53
CHRNB1-206ENST00000574054 C3orf36Q3SXR2 165 aa18.37■□□□□ 0.53
CHRNB1-206ENST00000574054 CARD17Q5XLA6 110 aa18.37■□□□□ 0.53
CHRNB1-206ENST00000574054 CYB5R2Q6BCY4 276 aa18.37■□□□□ 0.53
CHRNB1-206ENST00000574054 PODNL1Q6PEZ8 512 aa18.37■□□□□ 0.53
CHRNB1-206ENST00000574054 ULK3Q6PHR2 472 aa18.37■□□□□ 0.53
CHRNB1-206ENST00000574054 NET1Q7Z628 596 aaPredicted RBP18.37■□□□□ 0.53
CHRNB1-206ENST00000574054 PIK3C3Q8NEB9 887 aa18.37■□□□□ 0.53
CHRNB1-206ENST00000574054 SLC47A1Q96FL8 570 aa18.37■□□□□ 0.53
CHRNB1-206ENST00000574054 OR2M2Q96R28 347 aa18.37■□□□□ 0.53
CHRNB1-206ENST00000574054 SLC52A3Q9NQ40 469 aa18.37■□□□□ 0.53
CHRNB1-206ENST00000574054 TRBV5-3A0A0A0MS03 114 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 B9A039 149 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 TRAF3IP2O43734 574 aaPredicted RBP18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 FZD7O75084 574 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 SEC14L2O76054 403 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 IGLV1-44P01699 117 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 ZNF16P17020 682 aaPredicted RBP18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 CALCRP30988 508 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 NPRL3Q12980 569 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 SQLEQ14534 574 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 OR1Q1Q15612 314 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 ADIPOQQ15848 244 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 FAM91A1Q658Y4 838 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 ARMC8Q8IUR7 673 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 UEVLDQ8IX04 471 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 C10orf53Q8N6V4 93 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 ANKK1Q8NFD2 765 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 OR4F15Q8NGB8 312 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 SPATA3Q8NHX4 192 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 ZNF837Q96EG3 531 aaPredicted RBP18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 ATP6V1G3Q96LB4 118 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 EPYCQ99645 322 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 PIMREGQ9BSJ6 248 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 ASPNQ9BXN1 380 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 TMEM38AQ9H6F2 299 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 CDC42EP3Q9UKI2 254 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 ANGPT4Q9Y264 503 aa18.36■□□□□ 0.53
CHRNB1-206ENST00000574054 RNF212BA8MTL3 300 aa18.35■□□□□ 0.53
CHRNB1-206ENST00000574054 M0R3G1 203 aa18.35■□□□□ 0.53
CHRNB1-206ENST00000574054 SERPINB7O75635 380 aa18.35■□□□□ 0.53
CHRNB1-206ENST00000574054 IGHV4-31P0DP07 118 aa18.35■□□□□ 0.53
CHRNB1-206ENST00000574054 CBR1P16152 277 aa18.35■□□□□ 0.53
CHRNB1-206ENST00000574054 ATP4BP51164 291 aa18.35■□□□□ 0.53
CHRNB1-206ENST00000574054 MFSD13AQ14CX5 517 aa18.35■□□□□ 0.53
CHRNB1-206ENST00000574054 ADRM1Q16186 407 aa18.35■□□□□ 0.53
CHRNB1-206ENST00000574054 MYPOPQ86VE0 399 aaPredicted RBP18.35■□□□□ 0.53
CHRNB1-206ENST00000574054 RANBP3LQ86VV4 465 aaPredicted RBP18.35■□□□□ 0.53
CHRNB1-206ENST00000574054 TMEM123Q8N131 208 aa18.35■□□□□ 0.53
CHRNB1-206ENST00000574054 ADPRHL1Q8NDY3 354 aa18.35■□□□□ 0.53
CHRNB1-206ENST00000574054 HIPK4Q8NE63 616 aa18.35■□□□□ 0.53
CHRNB1-206ENST00000574054 CPPED1Q9BRF8 314 aaPredicted RBP18.35■□□□□ 0.53
CHRNB1-206ENST00000574054 CORINQ9Y5Q5 1042 aa18.35■□□□□ 0.53
CHRNB1-206ENST00000574054 A0A087WUJ7 227 aa18.34■□□□□ 0.53
CHRNB1-206ENST00000574054 A0A0B4J2E0 115 aa18.34■□□□□ 0.53
CHRNB1-206ENST00000574054 A0A1B0GX12 115 aa18.34■□□□□ 0.53
CHRNB1-206ENST00000574054 PDE5AO76074 875 aa18.34■□□□□ 0.53
CHRNB1-206ENST00000574054 HPRP00739 348 aa18.34■□□□□ 0.53
CHRNB1-206ENST00000574054 IGKV3-15P01624 115 aa18.34■□□□□ 0.53
CHRNB1-206ENST00000574054 HLA-DOBP13765 273 aa18.34■□□□□ 0.53
CHRNB1-206ENST00000574054 GPX2P18283 190 aa18.34■□□□□ 0.53
CHRNB1-206ENST00000574054 LSM11P83369 360 aaKnown RBP eCLIP18.34■□□□□ 0.53
CHRNB1-206ENST00000574054 PMS2P3Q13401 168 aa18.34■□□□□ 0.53
CHRNB1-206ENST00000574054 TTMPQ5BVD1 217 aa18.34■□□□□ 0.53
CHRNB1-206ENST00000574054 MDP1Q86V88 176 aa18.34■□□□□ 0.53
CHRNB1-206ENST00000574054 FAM169BQ8N8A8 192 aa18.34■□□□□ 0.53
CHRNB1-206ENST00000574054 SMYD1Q8NB12 490 aa18.34■□□□□ 0.53
CHRNB1-206ENST00000574054 BHLHE22Q8NFJ8 381 aaPredicted RBP18.34■□□□□ 0.53
CHRNB1-206ENST00000574054 THOC1Q96FV9 657 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms