RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 UGT1A4P22310 534 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 ANOS1P23352 680 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 FASP25445 335 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 HTR1FP30939 366 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 LCN1P31025 176 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 SPAM1P38567 509 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 TNFSF9P41273 254 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 TFPI2P48307 235 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 GSK3BP49841 420 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 PLK1P53350 603 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 BIDP55957 195 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 MAP3K7CLP57077 242 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 ERVPABLB-1P60509 514 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 RPL32P62910 135 aaKnown RBP1.68□□□□□ -2.14
CHD3-217ENST00000574022 LCN2P80188 198 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 CCDC173Q0VFZ6 552 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 TRDNQ13061 729 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 GPR176Q14439 515 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 SF3A2Q15428 464 aaKnown RBP1.68□□□□□ -2.14
CHD3-217ENST00000574022 USF2Q15853 346 aaPredicted RBP1.68□□□□□ -2.14
CHD3-217ENST00000574022 MARCH8Q5T0T0 291 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 C9orf66Q5T8R8 295 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 GPR107Q5VW38 600 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 ULK3Q6PHR2 472 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 REG3GQ6UW15 175 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 SPESP1Q6UW49 350 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 DNM1P46Q6ZS02 220 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 TMUB2Q71RG4 321 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 SNX20Q7Z614 316 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 CMC1Q7Z7K0 106 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 APRG1Q8IVJ8 170 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 C9orf40Q8IXQ3 194 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 MYOCDQ8IZQ8 938 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 SLC22A18ASQ8N1D0 253 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 SLC39A11Q8N1S5 342 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 ARHGAP18Q8N392 663 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 FTMTQ8N4E7 242 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 EID2Q8N6I1 236 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 FAM86B1Q8N7N1 296 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 ZNF614Q8N883 585 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 C4orf32Q8N8J7 132 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 LRRC75AQ8NAA5 344 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 GATSQ8NAP1 163 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 Q8NBF4 154 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 OR2A12Q8NGT7 310 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 SLC7A13Q8TCU3 470 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 CXorf40AQ8TE69 158 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 CCDC12Q8WUD4 166 aaPredicted RBP1.68□□□□□ -2.14
CHD3-217ENST00000574022 CAPSLQ8WWF8 208 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.68□□□□□ -2.14
CHD3-217ENST00000574022 MYDGFQ969H8 173 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 PSMG2Q969U7 264 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 ZBTB9Q96C00 473 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 ZNF501Q96CX3 271 aaPredicted RBP1.68□□□□□ -2.14
CHD3-217ENST00000574022 ECHDC3Q96DC8 303 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 SLC45A3Q96JT2 553 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 ZNF597Q96LX8 424 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 OR8B4Q96RC9 309 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 NODALQ96S42 347 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 ATF6BQ99941 703 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 TMEM246Q9BRR3 403 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 CCDC28BQ9BUN5 200 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 UCK2Q9BZX2 261 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 ACTR3CQ9C0K3 210 aaPredicted RBP1.68□□□□□ -2.14
CHD3-217ENST00000574022 ACTR6Q9GZN1 396 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 ELOVL4Q9GZR5 314 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 GBA3Q9H227 469 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 JPT2Q9H910 190 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 BEX1Q9HBH7 125 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 RETNQ9HD89 108 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 DMAP1Q9NPF5 467 aaPredicted RBP1.68□□□□□ -2.14
CHD3-217ENST00000574022 IL26Q9NPH9 171 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 ZNF302Q9NR11 478 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 HRASLS2Q9NWW9 162 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 GIN1Q9NXP7 522 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 SENP1Q9P0U3 644 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 SPRR3Q9UBC9 169 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 ABCD2Q9UBJ2 740 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 B4GALT7Q9UBV7 327 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 CACNG5Q9UF02 275 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 LSM7Q9UK45 103 aaKnown RBP1.68□□□□□ -2.14
CHD3-217ENST00000574022 C15orf41Q9Y2V0 281 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 KPTNQ9Y664 436 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 SAR1BQ9Y6B6 198 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 UBN2Q6ZU65 1347 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 SH3TC1Q8TE82 1336 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 DOCK7Q96N67 2140 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 A0A087X002 238 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 IGHV3-16A0A0C4DH30 117 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 A0A1B0GTH9 108 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 SMIM28A0A1B0GU29 152 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 FAM231BA6NCW3 169 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 DHRS7CA6NNS2 312 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 A8MX80 341 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 E9PAM4 449 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 K7ENP7 123 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 CDC7O00311 574 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 MGRN1O60291 552 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 GJB5O95377 273 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 NTN1O95631 604 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms