RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	TMED7-TICAM2	A0A0A6YYA0	188 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	OR10H3	O60404	316 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	HPR	P00739	348 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	ZNF26	P17031	533 aa	Predicted RBP	12.8	□□□□□ -0.36
ABR-223	ENST00000573895	PRKACG	P22612	351 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	PEX2	P28328	305 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	SHC1	P29353	583 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	CLK1	P49759	484 aa	Known RBP	12.8	□□□□□ -0.36
ABR-223	ENST00000573895	SIRPA	P78324	504 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	PRKCD	Q05655	676 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	COX10	Q12887	443 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	PPP1R8	Q12972	351 aa	Known RBP	12.8	□□□□□ -0.36
ABR-223	ENST00000573895	DAG1	Q14118	895 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	LRRC36	Q1X8D7	754 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	OTUD3	Q5T2D3	398 aa	Predicted RBP	12.8	□□□□□ -0.36
ABR-223	ENST00000573895	ZNF770	Q6IQ21	691 aa	Predicted RBP	12.8	□□□□□ -0.36
ABR-223	ENST00000573895	C1orf94	Q6P1W5	598 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	FAHD1	Q6P587	224 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	CDH24	Q86UP0	819 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	ADGRG3	Q86Y34	549 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	EPHX4	Q8IUS5	362 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	LURAP1L	Q8IV03	231 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	SLC43A2	Q8N370	569 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	LINC01560	Q8TB33	94 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	PIGX	Q8TBF5	258 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	GNPDA2	Q8TDQ7	276 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	STK35	Q8TDR2	534 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	FEV	Q99581	238 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	FANCF	Q9NPI8	374 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	TMED7	Q9Y3B3	224 aa		12.8	□□□□□ -0.36
ABR-223	ENST00000573895	SPIN1	Q9Y657	262 aa	Predicted RBP	12.8	□□□□□ -0.36
ABR-223	ENST00000573895	SH3D21	A4FU49	640 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895		A8MVM7	634 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	PDLIM1	O00151	329 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	ZNF208	O43345	1280 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	ADA	P00813	363 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	POU2F1	P14859	743 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	ALDH3A2	P51648	485 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	PPP2R2B	Q00005	443 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	FAM27E3	Q08E93	113 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	FOXD4	Q12950	439 aa	Predicted RBP	12.79	□□□□□ -0.36
ABR-223	ENST00000573895	SEC23B	Q15437	767 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	RFX4	Q33E94	735 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	TBPL2	Q6SJ96	375 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	CD300LD	Q6UXZ3	194 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	WDR88	Q6ZMY6	472 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	ZNF610	Q8N9Z0	462 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	ATG16L2	Q8NAA4	619 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	TMEM255B	Q8WV15	326 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	RDH12	Q96NR8	316 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	SLC29A1	Q99808	456 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	TACO1	Q9BSH4	297 aa	Known RBP	12.79	□□□□□ -0.36
ABR-223	ENST00000573895	DGCR6L	Q9BY27	220 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	POLDIP3	Q9BY77	421 aa	Known RBP	12.79	□□□□□ -0.36
ABR-223	ENST00000573895	SRXN1	Q9BYN0	137 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	POTEKP	Q9BYX7	375 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	OPN3	Q9H1Y3	402 aa	Predicted RBP	12.79	□□□□□ -0.36
ABR-223	ENST00000573895	CLEC4M	Q9H2X3	399 aa	Predicted RBP	12.79	□□□□□ -0.36
ABR-223	ENST00000573895	ENOPH1	Q9UHY7	261 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	EDAR	Q9UNE0	448 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	ORC6	Q9Y5N6	252 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	HIVEP1	P15822	2718 aa		12.79	□□□□□ -0.36
ABR-223	ENST00000573895	ITPR3	Q14573	2671 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	C16orf97	H3BN30	126 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	SOCS2	O14508	198 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	EI24	O14681	340 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	DNPH1	O43598	174 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	OR2T1	O43869	369 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	GAST	P01350	101 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	ALPL	P05186	524 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	CDH2	P19022	906 aa	Predicted RBP	12.78	□□□□□ -0.36
ABR-223	ENST00000573895	GSTM3	P21266	225 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	FUT4	P22083	530 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	CBL	P22681	906 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	AGTR1	P30556	359 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	UGT2B10	P36537	528 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	RAD23A	P54725	363 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	CSNK2A1	P68400	391 aa	Predicted RBP	12.78	□□□□□ -0.36
ABR-223	ENST00000573895	SYT14P1	Q58G82	188 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	KDM4D	Q6B0I6	523 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	TMPPE	Q6ZT21	453 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	BEND4	Q6ZU67	534 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	TMPRSS11F	Q6ZWK6	438 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	FCRLA	Q7L513	359 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	NRM	Q8IXM6	262 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	AQP11	Q8NBQ7	271 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	OR6S1	Q8NH40	331 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	MAGEE2	Q8TD90	523 aa	Predicted RBP	12.78	□□□□□ -0.36
ABR-223	ENST00000573895	ROBO4	Q8WZ75	1007 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	NINJ1	Q92982	152 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	DDIT4L	Q96D03	193 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	KIF17	Q9P2E2	1029 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	KLHL13	Q9P2N7	655 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	CHRNA9	Q9UGM1	479 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	POFUT2	Q9Y2G5	429 aa		12.78	□□□□□ -0.36
ABR-223	ENST00000573895	MAGED1	Q9Y5V3	778 aa	Predicted RBP	12.78	□□□□□ -0.36
ABR-223	ENST00000573895	CASK	O14936	926 aa		12.77	□□□□□ -0.37
ABR-223	ENST00000573895	YES1	P07947	543 aa		12.77	□□□□□ -0.37
ABR-223	ENST00000573895	IFI30	P13284	250 aa		12.77	□□□□□ -0.37
ABR-223	ENST00000573895	OMP	P47874	163 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms