RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 SLC25A15Q9Y619 301 aa11.78□□□□□ -0.52
RPAIN-207ENST00000570883 PLPP3O14495 311 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 GSTA4O15217 222 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 DCTN3O75935 186 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 ZNF682O95780 498 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 NQO1P15559 274 aaKnown RBP11.77□□□□□ -0.53
RPAIN-207ENST00000570883 POU3F1Q03052 451 aaPredicted RBP11.77□□□□□ -0.53
RPAIN-207ENST00000570883 BSPH1Q075Z2 132 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 PUDPQ08623 228 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 PMS2P3Q13401 168 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 C1DQ13901 141 aaKnown RBP11.77□□□□□ -0.53
RPAIN-207ENST00000570883 KEAP1Q14145 624 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 SPNS3Q6ZMD2 512 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 CBLL1Q75N03 491 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 SLC46A3Q7Z3Q1 461 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 UEVLDQ8IX04 471 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 TMEM123Q8N131 208 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 LRRC17Q8N6Y2 441 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 RNF148Q8N7C7 305 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 ANKS4BQ8N8V4 417 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 C1orf162Q8NEQ5 155 aaPredicted RBP11.77□□□□□ -0.53
RPAIN-207ENST00000570883 LILRB1Q8NHL6 650 aaPredicted RBP11.77□□□□□ -0.53
RPAIN-207ENST00000570883 PFN4Q8NHR9 129 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 TMEM255BQ8WV15 326 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 HSH2DQ96JZ2 352 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 FOXC2Q99958 501 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 LINC00470Q9BZP3 86 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 SLC19A3Q9BZV2 496 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 POLR2J2Q9GZM3 115 aaKnown RBP11.77□□□□□ -0.53
RPAIN-207ENST00000570883 POLR2J3Q9H1A7 115 aaKnown RBP11.77□□□□□ -0.53
RPAIN-207ENST00000570883 FKRPQ9H9S5 495 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 TAGLN3Q9UI15 199 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 A4GNTQ9UNA3 340 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 MTORP42345 2549 aa11.77□□□□□ -0.53
RPAIN-207ENST00000570883 ZNF587BE7ETH6 402 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 NDUFAB1O14561 156 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 FFAR1O14842 300 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 FAM107AO95990 144 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 SERPINA1P01009 418 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 ASAH2BP0C7U1 165 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 CDH2P19022 906 aaPredicted RBP11.76□□□□□ -0.53
RPAIN-207ENST00000570883 RBM34P42696 430 aaKnown RBP11.76□□□□□ -0.53
RPAIN-207ENST00000570883 LSM11P83369 360 aaKnown RBP eCLIP11.76□□□□□ -0.53
RPAIN-207ENST00000570883 IL1RL1Q01638 556 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 ACKR1Q16570 336 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 PHYHD1Q5SRE7 291 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 OR7E24Q6IFN5 339 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 TSEN54Q7Z6J9 526 aaKnown RBP11.76□□□□□ -0.53
RPAIN-207ENST00000570883 FITM2Q8N6M3 262 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 FAM156AQ8NDB6 213 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 KBTBD8Q8NFY9 601 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 OR5J2Q8NH18 312 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 IGFBPL1Q8WX77 278 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 GEMIN6Q8WXD5 167 aaKnown RBP11.76□□□□□ -0.53
RPAIN-207ENST00000570883 LZICQ8WZA0 190 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 NEUROG1Q92886 237 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 MUCL1Q96DR8 90 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 TXNDC15Q96J42 360 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 PRRC1Q96M27 445 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 ALPK1Q96QP1 1244 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 NELFAQ9H3P2 528 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 NGBQ9NPG2 151 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 SLC17A5Q9NRA2 495 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 MAN2C1Q9NTJ4 1040 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 C20orf141Q9NUB4 165 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 MED29Q9NX70 200 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 TAS2R5Q9NYW4 299 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 ADA2Q9NZK5 511 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 EGFL7Q9UHF1 273 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 RNF115Q9Y4L5 304 aa11.76□□□□□ -0.53
RPAIN-207ENST00000570883 OR6C65A6NJZ3 312 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 C11orf98E9PRG8 122 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 J3KTA2 159 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 HS3ST1O14792 307 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 CLOCKO15516 846 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 PIP5K1CO60331 668 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 SERPINI2O75830 405 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 KRT33AO76009 404 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 PRSS23O95084 383 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 MT-ND1P03886 318 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 IFNW1P05000 195 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 THRBP10828 461 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 YAP1P46937 504 aaKnown RBP11.75□□□□□ -0.53
RPAIN-207ENST00000570883 ZNF83P51522 516 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 ROR2Q01974 943 aaKnown RBP11.75□□□□□ -0.53
RPAIN-207ENST00000570883 TGFBR3Q03167 851 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 SPOCK1Q08629 439 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 FOXD4Q12950 439 aaPredicted RBP11.75□□□□□ -0.53
RPAIN-207ENST00000570883 FXNQ16595 210 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 DEFB113Q30KQ7 82 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 HIKESHIQ53FT3 197 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 IFI44LQ53G44 452 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 ADAM5Q6NVV9 412 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 PXKQ7Z7A4 578 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 OFCC1Q8IZS5 231 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 PGAM4Q8N0Y7 254 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 C17orf78Q8N4C9 275 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 FAM86B1Q8N7N1 296 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 OR1K1Q8NGR3 316 aa11.75□□□□□ -0.53
RPAIN-207ENST00000570883 TMEM239Q8WW34 195 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms