RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 CNOT4O95628 575 aaKnown RBP14.17□□□□□ -0.14
CIITA-204ENST00000570546 RACK1P63244 317 aaKnown RBP14.17□□□□□ -0.14
CIITA-204ENST00000570546 MANEAQ5SRI9 462 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 OVCH1Q7RTY7 1134 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 ZNF695Q8IW36 515 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 S100PBPQ96BU1 408 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 FTCDNL1E5RQL4 147 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 C1QBP02746 253 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 CD14P08571 375 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 NID1P14543 1247 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 TGM4P49221 684 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 CAV2P51636 162 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 CCR9P51686 369 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 LCORQ96JN0 433 aaPredicted RBP14.17□□□□□ -0.14
CIITA-204ENST00000570546 IL21Q9HBE4 155 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 SPHK1Q9NYA1 384 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 FBXL2Q9UKC9 423 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 DAPP1Q9UN19 280 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 CHST2Q9Y4C5 530 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 FER1L6Q2WGJ9 1857 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 CTNSO60931 367 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 SERPINA2P20848 420 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 S100PP25815 95 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 RPL35P42766 123 aaKnown RBP14.17□□□□□ -0.14
CIITA-204ENST00000570546 FABP5Q01469 135 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 NIPAL3Q6P499 406 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 OR7G2Q8NG99 324 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 ELF4Q99607 663 aaPredicted RBP14.17□□□□□ -0.14
CIITA-204ENST00000570546 CHRDQ9H2X0 955 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 BCL2L10Q9HD36 194 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 WASH6PQ9NQA3 447 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 ZNF175Q9Y473 711 aa14.17□□□□□ -0.14
CIITA-204ENST00000570546 TRHRP34981 398 aaPredicted RBP14.16□□□□□ -0.14
CIITA-204ENST00000570546 CLVS2Q5SYC1 327 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 TMPPEQ6ZT21 453 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 SLC16A9Q7RTY1 509 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 SULF2Q8IWU5 870 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 PDCD1LG2Q9BQ51 273 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 UNKLQ9H9P5 680 aaKnown RBP14.16□□□□□ -0.14
CIITA-204ENST00000570546 FGF22Q9HCT0 170 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 OBP2AQ9NY56 170 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 C1orf196B1AJZ1 125 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 SULT1B1O43704 296 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 BPNT1O95861 308 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 BDKRB2P30411 391 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 CLDN6P56747 220 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 KIAA1024LP59773 190 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 AKR1C8PQ5T2L2 129 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 FAM57BQ71RH2 274 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 ZNF611Q8N823 705 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 PDE4DIPQ5VU43 2346 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 TMED7-TICAM2A0A0A6YYA0 188 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 H3BUI4 141 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 LBX1P52954 281 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 BTN1A1Q13410 526 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 CNN3Q15417 329 aaKnown RBP14.16□□□□□ -0.14
CIITA-204ENST00000570546 ESCO2Q56NI9 601 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 ZNF679Q8IYX0 411 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 FRMD1Q8N878 549 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 ZNF454Q8N9F8 522 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 BBS1Q8NFJ9 593 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 SEC22CQ9BRL7 303 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 ACOXLQ9NUZ1 547 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 TMED7Q9Y3B3 224 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 B8ZZF3 427 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 HRGP04196 525 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 AKR1C2P52895 323 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 CAMK2DQ13557 499 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 SLC9A3R2Q15599 337 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 LCN10Q6JVE6 187 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 OR4K15Q8NH41 348 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 CMC2Q9NRP2 79 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 SIRT5Q9NXA8 310 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 TBC1D29Q9UFV1 150 aa14.16□□□□□ -0.14
CIITA-204ENST00000570546 TEX51A0A1B0GUA7 166 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 GALR3O60755 368 aaPredicted RBP14.15□□□□□ -0.14
CIITA-204ENST00000570546 CSF3P09919 207 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 SPNP16150 400 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 FASLGP48023 281 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 MECP2P51608 486 aaKnown RBP14.15□□□□□ -0.14
CIITA-204ENST00000570546 PER3P56645 1201 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 CAMKMTQ7Z624 323 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 OR1E3Q8WZA6 343 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 EHFQ9NZC4 300 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 SURF4O15260 269 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 NUDT21O43809 227 aaKnown RBP14.15□□□□□ -0.14
CIITA-204ENST00000570546 S100A12P80511 92 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 DUSP8Q13202 625 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 RTL6Q6ICC9 239 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 STEAP1BQ6NZ63 245 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 ANKRD33Q7Z3H0 272 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 NLGN4YQ8NFZ3 816 aaPredicted RBP14.15□□□□□ -0.14
CIITA-204ENST00000570546 HHIPL1Q96JK4 782 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 SLC46A1Q96NT5 459 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 ULBP3Q9BZM4 244 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 SPNS1Q9H2V7 528 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 GLTPQ9NZD2 209 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 PRICKLE3O43900 615 aaPredicted RBP14.15□□□□□ -0.14
CIITA-204ENST00000570546 DOK2O60496 412 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 HCCSP53701 268 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms