RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 IST1P53990 364 aa14.29□□□□□ -0.12
USB1-215ENST00000569252 PUDPQ08623 228 aa14.29□□□□□ -0.12
USB1-215ENST00000569252 COX10Q12887 443 aa14.29□□□□□ -0.12
USB1-215ENST00000569252 TSPAN31Q12999 210 aa14.29□□□□□ -0.12
USB1-215ENST00000569252 ZBED5Q49AG3 693 aa14.29□□□□□ -0.12
USB1-215ENST00000569252 ZER1Q7Z7L7 766 aa14.29□□□□□ -0.12
USB1-215ENST00000569252 STK32CQ86UX6 486 aa14.29□□□□□ -0.12
USB1-215ENST00000569252 MEX3DQ86XN8 651 aaKnown RBP14.29□□□□□ -0.12
USB1-215ENST00000569252 LRRC17Q8N6Y2 441 aa14.29□□□□□ -0.12
USB1-215ENST00000569252 CNEP1R1Q8N9A8 125 aa14.29□□□□□ -0.12
USB1-215ENST00000569252 C9orf106Q8NAJ2 232 aa14.29□□□□□ -0.12
USB1-215ENST00000569252 RNF128Q8TEB7 428 aa14.29□□□□□ -0.12
USB1-215ENST00000569252 FUZQ9BT04 418 aa14.29□□□□□ -0.12
USB1-215ENST00000569252 PARPBPQ9NWS1 579 aa14.29□□□□□ -0.12
USB1-215ENST00000569252 ITGB1BP2Q9UKP3 347 aa14.29□□□□□ -0.12
USB1-215ENST00000569252 A0A1W2PRG6 482 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 ARRDC5A6NEK1 342 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 C11orf98E9PRG8 122 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 H3BNX3 289 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 AKAP8O43823 692 aaKnown RBP14.28□□□□□ -0.12
USB1-215ENST00000569252 FPR3P25089 353 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 CTSSP25774 331 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 RPL4P36578 427 aaKnown RBP14.28□□□□□ -0.12
USB1-215ENST00000569252 ZP4Q12836 540 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 LAPTM4AQ15012 233 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 RCN1Q15293 331 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 PGBD2Q6P3X8 592 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 PLXDC2Q6UX71 529 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 SLC46A3Q7Z3Q1 461 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 PXKQ7Z7A4 578 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 GALNT5Q7Z7M9 940 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 PQLC1Q8N2U9 271 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 KDM8Q8N371 416 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 ANKK1Q8NFD2 765 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 OR9Q2Q8NGE9 314 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 ABHD3Q8WU67 409 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 GTPBP3Q969Y2 492 aaKnown RBP14.28□□□□□ -0.12
USB1-215ENST00000569252 TNFRSF13CQ96RJ3 184 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 FEVQ99581 238 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 OSBPL10Q9BXB5 764 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 NTN4Q9HB63 628 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 VNN3Q9NY84 501 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 CLEC4AQ9UMR7 237 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 NOSIPQ9Y314 301 aaKnown RBP14.28□□□□□ -0.12
USB1-215ENST00000569252 ORC6Q9Y5N6 252 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 NOX1Q9Y5S8 564 aa14.28□□□□□ -0.12
USB1-215ENST00000569252 GTF3C1Q12789 2109 aa14.27□□□□□ -0.12
USB1-215ENST00000569252 LOC102725191A0A1B0GVB3 256 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 ZNF726A6NNF4 738 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 ZNF724A8MTY0 619 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 MS4A18H0YCH9 400 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 DVL2O14641 736 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 MRPL33O75394 65 aaKnown RBP14.27□□□□□ -0.13
USB1-215ENST00000569252 SERPINI2O75830 405 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 AQP2P41181 271 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 LSM11P83369 360 aaKnown RBP eCLIP14.27□□□□□ -0.131e-9■■■■■ 34.8
USB1-215ENST00000569252 SLC17A1Q14916 467 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 MS4A18Q3C1V0 323 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 ALG10Q5BKT4 473 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 RPL13AP3Q6NVV1 102 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 FAM214BQ7L5A3 538 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 TUSC5Q8IXB3 177 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 GCNT2Q8N0V5 402 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 OR9K2Q8NGE7 335 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 OR13C2Q8NGS9 318 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 ASB5Q8WWX0 329 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 DNAJC9Q8WXX5 260 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 ZNF775Q96BV0 537 aaPredicted RBP14.27□□□□□ -0.13
USB1-215ENST00000569252 DMRTA2Q96SC8 542 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 PSD2Q9BQI7 771 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 C9orf16Q9BUW7 83 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 SFXN3Q9BWM7 321 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 DGCR6LQ9BY27 220 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 UCK2Q9BZX2 261 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 INIPQ9NRY2 104 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 ZNF629Q9UEG4 869 aaPredicted RBP14.27□□□□□ -0.13
USB1-215ENST00000569252 HIF3AQ9Y2N7 669 aa14.27□□□□□ -0.13
USB1-215ENST00000569252 TRAV27A0A087WT01 109 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 A0A1W2PNV4 684 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 SAC3D1A6NKF1 404 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 NDUFB2O95178 105 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 ADAP00813 363 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 ANPEPP15144 967 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 PRKACGP22612 351 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 CEACAM8P31997 349 aaPredicted RBP14.26□□□□□ -0.13
USB1-215ENST00000569252 SLC16A1P53985 500 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 SIRPAP78324 504 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 POU4F3Q15319 338 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 HMBOX1Q6NT76 420 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 SMARCD3Q6STE5 483 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 CREB3L2Q70SY1 520 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 HDDC2Q7Z4H3 204 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 TMEM179BQ7Z7N9 219 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 ZNF100Q8IYN0 542 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 RPRMLQ8N4K4 120 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 OR52L1Q8NGH7 329 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 ITLN2Q8WWU7 325 aaPredicted RBP14.26□□□□□ -0.13
USB1-215ENST00000569252 EME1Q96AY2 570 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 LRRC46Q96FV0 321 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 TEX12Q9BXU0 123 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms