RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-215	ENST00000568676	C3orf56	Q8N813	242 aa		13.58	□□□□□ -0.24
HERPUD1-215	ENST00000568676	GLB1L3	Q8NCI6	653 aa	Predicted RBP	13.58	□□□□□ -0.24
HERPUD1-215	ENST00000568676	FAM216A	Q8WUB2	273 aa		13.58	□□□□□ -0.24
HERPUD1-215	ENST00000568676	RDH5	Q92781	318 aa		13.58	□□□□□ -0.24
HERPUD1-215	ENST00000568676	SPATA9	Q9BWV2	254 aa		13.58	□□□□□ -0.24
HERPUD1-215	ENST00000568676	C12orf10	Q9HB07	376 aa		13.58	□□□□□ -0.24
HERPUD1-215	ENST00000568676	HIF1AN	Q9NWT6	349 aa		13.58	□□□□□ -0.24
HERPUD1-215	ENST00000568676	HAO1	Q9UJM8	370 aa		13.58	□□□□□ -0.24
HERPUD1-215	ENST00000568676	FBXL3	Q9UKT7	428 aa		13.58	□□□□□ -0.24
HERPUD1-215	ENST00000568676	ZNF443	Q9Y2A4	671 aa	Predicted RBP	13.58	□□□□□ -0.24
HERPUD1-215	ENST00000568676		A0A0G2JPF8	293 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	HNRNPCL2	B2RXH8	293 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	HNRNPCL3	B7ZW38	293 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	FAM157A	C9JC47	383 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	TRIM77	I1YAP6	450 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	AIM2	O14862	343 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	ITM2A	O43736	263 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	HNRNPCL1	O60812	293 aa	Known RBP	13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	HNRNPCL4	P0DMR1	293 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	ANPEP	P15144	967 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	GLRX	P35754	106 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	CAPZA2	P47755	286 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	LIMS1	P48059	325 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	CHI3L2	Q15782	390 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	GSG1	Q2KHT4	349 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	MMEL1	Q495T6	779 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	COX20	Q5RI15	118 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	FAM69A	Q5T7M9	428 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	KRT80	Q6KB66	452 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	MDP1	Q86V88	176 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	OR51F2	Q8NH61	342 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	SLC25A36	Q96CQ1	311 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	LRR1	Q96L50	414 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	ZBTB18	Q99592	522 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	PTDSS2	Q9BVG9	487 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	RBM4	Q9BWF3	364 aa	Known RBP	13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	RACGAP1	Q9H0H5	632 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	ZNF385D	Q9H6B1	395 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	MEAF6	Q9HAF1	191 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	NOX1	Q9Y5S8	564 aa		13.57	□□□□□ -0.24
HERPUD1-215	ENST00000568676	TRAV20	A0A0B4J274	112 aa		13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	TMEM89	A2RUT3	159 aa		13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	RFXANK	O14593	260 aa		13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	C1QC	P02747	245 aa		13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	GSN	P06396	782 aa		13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	SAG	P10523	405 aa	Predicted RBP	13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	RPS5	P46782	204 aa	Known RBP	13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	HILS1	P60008	231 aa		13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	MFSD13A	Q14CX5	517 aa		13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	MAPK11	Q15759	364 aa		13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	TRMT5	Q32P41	509 aa	Known RBP	13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	PDCD4	Q53EL6	469 aa	Known RBP	13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	ELFN2	Q5R3F8	820 aa		13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	C6orf89	Q6UWU4	347 aa		13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	ZNF627	Q7L945	461 aa		13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	ADPRHL1	Q8NDY3	354 aa		13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	CLDND2	Q8NHS1	167 aa		13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	PNPT1	Q8TCS8	783 aa	Known RBP	13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	SLC38A5	Q8WUX1	472 aa		13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	GCDH	Q92947	438 aa	Predicted RBP	13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	SLC38A4	Q969I6	547 aa		13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	ZNF416	Q9BWM5	594 aa		13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	NUF2	Q9BZD4	464 aa		13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	MRPL37	Q9BZE1	423 aa	Known RBP	13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	TPK1	Q9H3S4	243 aa		13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	B3GAT2	Q9NPZ5	323 aa		13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	AIG1	Q9NVV5	245 aa		13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	B3GNT2	Q9NY97	397 aa		13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	B3GAT1	Q9P2W7	334 aa		13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	ZNF346	Q9UL40	294 aa	Known RBP	13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	PCDHB10	Q9UN67	800 aa		13.56	□□□□□ -0.24
HERPUD1-215	ENST00000568676	IL6	P05231	212 aa		13.55	□□□□□ -0.24
HERPUD1-215	ENST00000568676	BCHE	P06276	602 aa		13.55	□□□□□ -0.24
HERPUD1-215	ENST00000568676	ZCCHC18	P0CG32	403 aa		13.55	□□□□□ -0.24
HERPUD1-215	ENST00000568676	ZNF35	P13682	527 aa		13.55	□□□□□ -0.24
HERPUD1-215	ENST00000568676	CDKN2C	P42773	168 aa		13.55	□□□□□ -0.24
HERPUD1-215	ENST00000568676	CRAT	P43155	626 aa		13.55	□□□□□ -0.24
HERPUD1-215	ENST00000568676	SLC1A6	P48664	564 aa		13.55	□□□□□ -0.24
HERPUD1-215	ENST00000568676	DSTN	P60981	165 aa		13.55	□□□□□ -0.24
HERPUD1-215	ENST00000568676	UFM1	P61960	85 aa		13.55	□□□□□ -0.24
HERPUD1-215	ENST00000568676	GALK2	Q01415	458 aa		13.55	□□□□□ -0.24
HERPUD1-215	ENST00000568676	EGR4	Q05215	589 aa		13.55	□□□□□ -0.24
HERPUD1-215	ENST00000568676	ATG16L1	Q676U5	607 aa		13.55	□□□□□ -0.24
HERPUD1-215	ENST00000568676	H1FNT	Q75WM6	255 aa	Predicted RBP	13.55	□□□□□ -0.24
HERPUD1-215	ENST00000568676	TMEM123	Q8N131	208 aa		13.55	□□□□□ -0.24
HERPUD1-215	ENST00000568676	KDM8	Q8N371	416 aa		13.55	□□□□□ -0.24
HERPUD1-215	ENST00000568676	CLIP4	Q8N3C7	705 aa		13.55	□□□□□ -0.24
HERPUD1-215	ENST00000568676	MGARP	Q8TDB4	240 aa		13.55	□□□□□ -0.24
HERPUD1-215	ENST00000568676	TEX37	Q96LM6	180 aa		13.55	□□□□□ -0.24
HERPUD1-215	ENST00000568676	OR2M2	Q96R28	347 aa		13.55	□□□□□ -0.24
HERPUD1-215	ENST00000568676	RPS6KB2	Q9UBS0	482 aa		13.55	□□□□□ -0.24
HERPUD1-215	ENST00000568676	ZNF503-AS2	A6NEH8	195 aa		13.54	□□□□□ -0.24
HERPUD1-215	ENST00000568676	LYNX1	G3V0Z9	82 aa		13.54	□□□□□ -0.24
HERPUD1-215	ENST00000568676	TM9SF1	O15321	606 aa		13.54	□□□□□ -0.24
HERPUD1-215	ENST00000568676	ENTPD5	O75356	428 aa		13.54	□□□□□ -0.24
HERPUD1-215	ENST00000568676	PNP	P00491	289 aa		13.54	□□□□□ -0.24
HERPUD1-215	ENST00000568676	LYNX1	P0DP58	116 aa		13.54	□□□□□ -0.24
HERPUD1-215	ENST00000568676	GAA	P10253	952 aa		13.54	□□□□□ -0.24
HERPUD1-215	ENST00000568676	PRG2	P13727	222 aa		13.54	□□□□□ -0.24
HERPUD1-215	ENST00000568676	CREB1	P16220	341 aa		13.54	□□□□□ -0.24

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