RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 B4GALT2O60909 372 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 COQ9O75208 318 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 ATP6V1G1O75348 118 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 ERAL1O75616 437 aaKnown RBP4.82□□□□□ -1.64
CAPN3-217ENST00000567817 RCBTB2O95199 551 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 SOX14O95416 240 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 PAK4O96013 591 aaPredicted RBP4.82□□□□□ -1.64
CAPN3-217ENST00000567817 KRT8P05787 483 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 CHRM4P08173 479 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 CHRM5P08912 532 aaPredicted RBP4.82□□□□□ -1.64
CAPN3-217ENST00000567817 HOXB2P14652 356 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 GABRG2P18507 467 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 PAICSP22234 425 aaKnown RBP4.82□□□□□ -1.64
CAPN3-217ENST00000567817 F8A1P23610 371 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 MMP11P24347 488 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 NTSR1P30989 418 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 UQCRC1P31930 480 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 TNFSF8P32971 234 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 GRK5P34947 590 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 NUDT1P36639 197 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 CRYBB2P43320 205 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 OMPP47874 163 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 METAP1P53582 386 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 ADPRHP54922 357 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 CASP9P55211 416 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 CDH11P55287 796 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 TIRAPP58753 221 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 PPP3R1P63098 170 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 ACTC1P68032 377 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 ACTA1P68133 377 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 PSPHP78330 225 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 ASAH1Q13510 395 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 DNASE1L3Q13609 305 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 LY6DQ14210 128 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 NFATC4Q14934 902 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 SYPL1Q16563 259 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 ARHGAP11BQ3KRB8 267 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 RNASE12Q5GAN4 147 aaKnown RBP4.82□□□□□ -1.64
CAPN3-217ENST00000567817 PDZK1Q5T2W1 519 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 AGAP6Q5VW22 663 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 HACD4Q5VWC8 232 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 FCRL6Q6DN72 434 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 KRTAP5-3Q6L8H2 238 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 MZT2BQ6NZ67 158 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 INO80CQ6PI98 192 aaPredicted RBP4.82□□□□□ -1.64
CAPN3-217ENST00000567817 TMEM107Q6UX40 140 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 CLEC18BQ6UXF7 455 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 CCBE1Q6UXH8 406 aaPredicted RBP4.82□□□□□ -1.64
CAPN3-217ENST00000567817 PAMR1Q6UXH9 720 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 ZNF66Q6ZN08 573 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 ZNF793Q6ZN11 406 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 QSOX2Q6ZRP7 698 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 PLEKHM3Q6ZWE6 761 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 KCTD20Q7Z5Y7 419 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 PAQR7Q86WK9 346 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 RAB43Q86YS6 212 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 CDK20Q8IZL9 346 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 OR2L13Q8N349 312 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 C2orf73Q8N5S3 287 aaPredicted RBP4.82□□□□□ -1.64
CAPN3-217ENST00000567817 CDRT4Q8N9R6 151 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 CLEC18CQ8NCF0 446 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 OR4K14Q8NGD5 310 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 OR52I1Q8NGK6 324 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 OR5D16Q8NGK9 328 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 OR8K5Q8NH50 307 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 OR52P1PQ8NH57 321 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 SLC2A12Q8TD20 617 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 HAVCR2Q8TDQ0 301 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 ADAMTS18Q8TE60 1221 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 GANCQ8TET4 914 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 KCNE4Q8WWG9 221 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 LCN9Q8WX39 176 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 RERGQ96A58 199 aaPredicted RBP4.82□□□□□ -1.64
CAPN3-217ENST00000567817 RNFT2Q96EX2 444 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 CNRIP1Q96F85 164 aaPredicted RBP4.82□□□□□ -1.64
CAPN3-217ENST00000567817 MRPL48Q96GC5 212 aaKnown RBP4.82□□□□□ -1.64
CAPN3-217ENST00000567817 HS6ST2Q96MM7 605 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 ZNF681Q96N22 645 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 AGAP4Q96P64 663 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 CCNL2Q96S94 520 aaPredicted RBP4.82□□□□□ -1.64
CAPN3-217ENST00000567817 APOOQ9BUR5 198 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 OR2B2Q9GZK3 357 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 TWSG1Q9GZX9 223 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 ABCG4Q9H172 646 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 SLC38A1Q9H2H9 487 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 SRMSQ9H3Y6 488 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 PIGUQ9H490 435 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 STARD5Q9NSY2 213 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 MAN2C1Q9NTJ4 1040 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 POT1Q9NUX5 634 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 FBXL12Q9NXK8 326 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 DNAJC27Q9NZQ0 273 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 RHCGQ9UBD6 479 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 ZNF221Q9UK13 617 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 EXOGQ9Y2C4 368 aaKnown RBP4.82□□□□□ -1.64
CAPN3-217ENST00000567817 ATG4BQ9Y4P1 393 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 OR1A2Q9Y585 309 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 TLN1Q9Y490 2541 aaKnown RBP4.82□□□□□ -1.64
CAPN3-217ENST00000567817 CEP192Q8TEP8 1941 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 CABIN1Q9Y6J0 2220 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms