RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 NUP37Q8NFH4 326 aa16.22■□□□□ 0.19
LINC01238-205ENST00000567549 GTF2H4Q92759 462 aa16.22■□□□□ 0.19
LINC01238-205ENST00000567549 BCL2L2Q92843 193 aaPredicted RBP16.22■□□□□ 0.19
LINC01238-205ENST00000567549 VPS33AQ96AX1 596 aa16.22■□□□□ 0.19
LINC01238-205ENST00000567549 SLC47A1Q96FL8 570 aa16.22■□□□□ 0.19
LINC01238-205ENST00000567549 TCF7L2Q9NQB0 619 aa16.22■□□□□ 0.19
LINC01238-205ENST00000567549 SLC6A13Q9NSD5 602 aa16.22■□□□□ 0.19
LINC01238-205ENST00000567549 TESQ9UGI8 421 aaKnown RBP16.22■□□□□ 0.19
LINC01238-205ENST00000567549 SPEF1Q9Y4P9 236 aa16.22■□□□□ 0.19
LINC01238-205ENST00000567549 USH1CQ9Y6N9 552 aa16.22■□□□□ 0.19
LINC01238-205ENST00000567549 COL6A5A8TX70 2615 aa16.21■□□□□ 0.19
LINC01238-205ENST00000567549 TRAV36DV7A0A075B6V5 113 aa16.21■□□□□ 0.19
LINC01238-205ENST00000567549 A0A096LNT2 108 aa16.21■□□□□ 0.19
LINC01238-205ENST00000567549 LOC102725191A0A1B0GVB3 256 aa16.21■□□□□ 0.19
LINC01238-205ENST00000567549 GPRIN2O60269 458 aa16.21■□□□□ 0.19
LINC01238-205ENST00000567549 PRG2P13727 222 aa16.21■□□□□ 0.19
LINC01238-205ENST00000567549 DRD4P21917 467 aa16.21■□□□□ 0.19
LINC01238-205ENST00000567549 THBS2P35442 1172 aa16.21■□□□□ 0.19
LINC01238-205ENST00000567549 P2RY4P51582 365 aa16.21■□□□□ 0.19
LINC01238-205ENST00000567549 NAAAQ02083 359 aa16.21■□□□□ 0.19
LINC01238-205ENST00000567549 ALG10BQ5I7T1 473 aa16.21■□□□□ 0.19
LINC01238-205ENST00000567549 GCNT6Q5T4J0 391 aa16.21■□□□□ 0.19
LINC01238-205ENST00000567549 H1FNTQ75WM6 255 aaPredicted RBP16.21■□□□□ 0.19
LINC01238-205ENST00000567549 EPHX4Q8IUS5 362 aa16.21■□□□□ 0.19
LINC01238-205ENST00000567549 OR6S1Q8NH40 331 aa16.21■□□□□ 0.19
LINC01238-205ENST00000567549 NANOS1Q8WY41 292 aaKnown RBP16.21■□□□□ 0.19
LINC01238-205ENST00000567549 C7orf26Q96N11 449 aa16.21■□□□□ 0.19
LINC01238-205ENST00000567549 ASPNQ9BXN1 380 aa16.21■□□□□ 0.19
LINC01238-205ENST00000567549 ZNF442Q9H7R0 627 aa16.21■□□□□ 0.19
LINC01238-205ENST00000567549 TMEM27Q9HBJ8 222 aa16.21■□□□□ 0.19
LINC01238-205ENST00000567549 FBXL3Q9UKT7 428 aa16.21■□□□□ 0.19
LINC01238-205ENST00000567549 USP22Q9UPT9 525 aa16.21■□□□□ 0.19
LINC01238-205ENST00000567549 ARFGEF3Q5TH69 2177 aa16.2■□□□□ 0.18
LINC01238-205ENST00000567549 FTCDNL1E5RQL4 147 aa16.2■□□□□ 0.18
LINC01238-205ENST00000567549 LMX1BO60663 402 aa16.2■□□□□ 0.18
LINC01238-205ENST00000567549 IGKV3-15P01624 115 aa16.2■□□□□ 0.18
LINC01238-205ENST00000567549 OR4A8P0C604 315 aa16.2■□□□□ 0.18
LINC01238-205ENST00000567549 APEHP13798 732 aaKnown RBP16.2■□□□□ 0.18
LINC01238-205ENST00000567549 NQO1P15559 274 aaKnown RBP16.2■□□□□ 0.18
LINC01238-205ENST00000567549 CBR1P16152 277 aa16.2■□□□□ 0.18
LINC01238-205ENST00000567549 GGTLC2Q14390 218 aa16.2■□□□□ 0.18
LINC01238-205ENST00000567549 IQCCQ4KMZ1 466 aa16.2■□□□□ 0.18
LINC01238-205ENST00000567549 DHRS4L2Q6PKH6 230 aa16.2■□□□□ 0.18
LINC01238-205ENST00000567549 EPGNQ6UW88 154 aa16.2■□□□□ 0.18
LINC01238-205ENST00000567549 RANBP3LQ86VV4 465 aaPredicted RBP16.2■□□□□ 0.18
LINC01238-205ENST00000567549 UEVLDQ8IX04 471 aa16.2■□□□□ 0.18
LINC01238-205ENST00000567549 NEU4Q8WWR8 484 aaPredicted RBP16.2■□□□□ 0.18
LINC01238-205ENST00000567549 HTRA1Q92743 480 aa16.2■□□□□ 0.18
LINC01238-205ENST00000567549 OR52B2Q96RD2 323 aa16.2■□□□□ 0.18
LINC01238-205ENST00000567549 PAIP1Q9H074 479 aaKnown RBP16.2■□□□□ 0.18
LINC01238-205ENST00000567549 RABEP2Q9H5N1 569 aa16.2■□□□□ 0.18
LINC01238-205ENST00000567549 DENND2DQ9H6A0 471 aaPredicted RBP16.2■□□□□ 0.18
LINC01238-205ENST00000567549 FZD7O75084 574 aa16.19■□□□□ 0.18
LINC01238-205ENST00000567549 UPK3AO75631 287 aa16.19■□□□□ 0.18
LINC01238-205ENST00000567549 IGLV1-44P01699 117 aa16.19■□□□□ 0.18
LINC01238-205ENST00000567549 C8BP07358 591 aa16.19■□□□□ 0.18
LINC01238-205ENST00000567549 SLC6A2P23975 617 aa16.19■□□□□ 0.18
LINC01238-205ENST00000567549 NR4A2P43354 598 aa16.19■□□□□ 0.18
LINC01238-205ENST00000567549 IDH3GP51553 393 aaPredicted RBP16.19■□□□□ 0.18
LINC01238-205ENST00000567549 CDK6Q00534 326 aa16.19■□□□□ 0.18
LINC01238-205ENST00000567549 CARTPTQ16568 116 aa16.19■□□□□ 0.18
LINC01238-205ENST00000567549 GTDC1Q4AE62 458 aa16.19■□□□□ 0.18
LINC01238-205ENST00000567549 LRIF1Q5T3J3 769 aa16.19■□□□□ 0.18
LINC01238-205ENST00000567549 SWT1Q5T5J6 900 aaKnown RBP16.19■□□□□ 0.18
LINC01238-205ENST00000567549 GKAP1Q5VSY0 366 aaPredicted RBP16.19■□□□□ 0.18
LINC01238-205ENST00000567549 SCAIQ8N9R8 606 aa16.19■□□□□ 0.18
LINC01238-205ENST00000567549 OR9I1Q8NGQ6 314 aa16.19■□□□□ 0.18
LINC01238-205ENST00000567549 RNF217Q8TC41 542 aa16.19■□□□□ 0.18
LINC01238-205ENST00000567549 PLK3Q9H4B4 646 aa16.19■□□□□ 0.18
LINC01238-205ENST00000567549 YLPM1P49750 1951 aaKnown RBP16.18■□□□□ 0.18
LINC01238-205ENST00000567549 A0A096LPE4 126 aa16.18■□□□□ 0.18
LINC01238-205ENST00000567549 A0A1W2PPZ6 126 aa16.18■□□□□ 0.18
LINC01238-205ENST00000567549 ZNF99A8MXY4 864 aaPredicted RBP16.18■□□□□ 0.18
LINC01238-205ENST00000567549 CECR9P0C854 216 aa16.18■□□□□ 0.18
LINC01238-205ENST00000567549 IGHV4-31P0DP07 118 aa16.18■□□□□ 0.18
LINC01238-205ENST00000567549 ARAFP10398 606 aa16.18■□□□□ 0.18
LINC01238-205ENST00000567549 NPR2P20594 1047 aa16.18■□□□□ 0.18
LINC01238-205ENST00000567549 CAPZA2P47755 286 aa16.18■□□□□ 0.18
LINC01238-205ENST00000567549 RGS8P57771 180 aaPredicted RBP16.18■□□□□ 0.18
LINC01238-205ENST00000567549 ARF1P84077 181 aaKnown RBP16.18■□□□□ 0.18
LINC01238-205ENST00000567549 SLC2A7Q6PXP3 512 aa16.18■□□□□ 0.18
LINC01238-205ENST00000567549 VHLLQ6RSH7 139 aa16.18■□□□□ 0.18
LINC01238-205ENST00000567549 ZNF771Q7L3S4 317 aaPredicted RBP16.18■□□□□ 0.18
LINC01238-205ENST00000567549 MAL2Q969L2 176 aa16.18■□□□□ 0.18
LINC01238-205ENST00000567549 SPDL1Q96EA4 605 aa16.18■□□□□ 0.18
LINC01238-205ENST00000567549 KTI12Q96EK9 354 aaPredicted RBP16.18■□□□□ 0.18
LINC01238-205ENST00000567549 LRR1Q96L50 414 aa16.18■□□□□ 0.18
LINC01238-205ENST00000567549 SORCS2Q96PQ0 1159 aa16.18■□□□□ 0.18
LINC01238-205ENST00000567549 CCDC28BQ9BUN5 200 aa16.18■□□□□ 0.18
LINC01238-205ENST00000567549 PTDSS2Q9BVG9 487 aa16.18■□□□□ 0.18
LINC01238-205ENST00000567549 FAM107BQ9H098 131 aa16.18■□□□□ 0.18
LINC01238-205ENST00000567549 TMEM38AQ9H6F2 299 aa16.18■□□□□ 0.18
LINC01238-205ENST00000567549 CRLF2Q9HC73 371 aa16.18■□□□□ 0.18
LINC01238-205ENST00000567549 GPR35Q9HC97 309 aa16.18■□□□□ 0.18
LINC01238-205ENST00000567549 DYNLRB1Q9NP97 96 aa16.18■□□□□ 0.18
LINC01238-205ENST00000567549 ANGPT4Q9Y264 503 aa16.18■□□□□ 0.18
LINC01238-205ENST00000567549 NOX1Q9Y5S8 564 aa16.18■□□□□ 0.18
LINC01238-205ENST00000567549 GMEB1Q9Y692 573 aa16.18■□□□□ 0.18
LINC01238-205ENST00000567549 DNHD1Q96M86 4753 aa16.17■□□□□ 0.18
LINC01238-205ENST00000567549 LOC100289279A0A1B0GTE1 492 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms