RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 GFYI3L273 518 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 SOCS2O14508 198 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 TOR1AO14656 332 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 XRCC2O43543 280 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 GMDSO60547 372 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 UGT2B17O75795 530 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 CLDN1O95832 211 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 IGHG4P01861 327 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 RPN2P04844 631 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 LGALS2P05162 132 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 CELA2AP08217 269 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 ACSM4P0C7M7 580 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 DUX4L2P0CJ85 424 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 DUX4L3P0CJ86 424 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 DUX4L4P0CJ87 422 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 DUX4L5P0CJ88 424 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 DUX4L6P0CJ89 424 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 DUX4L7P0CJ90 424 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 RBMY1CP0DJD4 496 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNF26P17031 533 aaPredicted RBP2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 COX5AP20674 150 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 OPRD1P41143 372 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 OPRL1P41146 370 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 CRATP43155 626 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 HAAOP46952 286 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 CSNK1A1P48729 337 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 KPNA2P52292 529 aaKnown RBP2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 CRYBA2P53672 197 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 CLDN18P56856 261 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 UBE2G2P60604 165 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 UBE2IP63279 158 aaKnown RBP2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNF154Q13106 437 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 FASTKQ14296 549 aaKnown RBP2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 NECTIN1Q15223 517 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 MOGAT2Q3SYC2 334 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 MS4A13Q5J8X5 152 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 MUC21Q5SSG8 566 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 STUMQ69YW2 141 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 DUX4L9Q6RFH8 374 aaPredicted RBP2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 STAC2Q6ZMT1 411 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 NUFIP2Q7Z417 695 aaKnown RBP2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 HDDC2Q7Z4H3 204 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 NKAIN4Q8IVV8 208 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 MCOLN2Q8IZK6 566 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 RNF10Q8N5U6 811 aaKnown RBP2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNRF1Q8ND25 227 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 PRSS33Q8NF86 280 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 OR7G1Q8NGA0 311 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 OR56A4Q8NGH8 313 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNF502Q8TBZ5 544 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 ZPLD1Q8TCW7 415 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 TCTEX1D2Q8WW35 142 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 IL1F10Q8WWZ1 152 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 MRPS31Q92665 395 aaKnown RBP2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 TFGQ92734 400 aaPredicted RBP2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 NEUROG1Q92886 237 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 TNFRSF14Q92956 283 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 CPB2Q96IY4 423 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 C9orf72Q96LT7 481 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 FOXN4Q96NZ1 517 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 OPALINQ96PE5 141 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 C7orf50Q9BRJ6 194 aaKnown RBP2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 UTP23Q9BRU9 249 aaKnown RBP2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 KRTAP1-5Q9BYS1 174 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 HOXD1Q9GZZ0 328 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 NAT10Q9H0A0 1025 aaKnown RBP2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 OR52A5Q9H2C5 316 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 NIPAL2Q9H841 368 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 TMEM165Q9HC07 324 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 EML4Q9HC35 981 aaKnown RBP2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 QPCTLQ9NXS2 382 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 STMN3Q9NZ72 180 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 SLC17A7Q9P2U7 560 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 RNF7Q9UBF6 113 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 ABCD2Q9UBJ2 740 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 UXTQ9UBK9 157 aaPredicted RBP2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 DUX4Q9UBX2 424 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 WARS2Q9UGM6 360 aaKnown RBP2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 SLC17A4Q9Y2C5 497 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 YARS2Q9Y2Z4 477 aaKnown RBP2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 MROH2BQ7Z745 1585 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 KDM5BQ9UGL1 1544 aa2.78□□□□□ -1.97
HERPUD1-211ENST00000566550 CD109Q6YHK3 1445 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 CNTNAP1P78357 1384 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 CAMTA1Q9Y6Y1 1673 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 TRBV5-4A0A0C4DH59 114 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 TEX48A0A1B0GUV7 120 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 A0A1W2PQ72 361 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 MSGN1A6NI15 193 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 NDUFAB1O14561 156 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 MBTPS2O43462 519 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 ENSAO43768 121 aaKnown RBP2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 TYROBPO43914 113 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 SOX15O60248 233 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 UGT1A9O60656 530 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 RBMXL2O75526 392 aaKnown RBP2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 SC5DO75845 299 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 PRSS56P0CW18 603 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 IL32P24001 234 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 HTR2CP28335 458 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms