RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 RELTQ969Z4 430 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 KTI12Q96EK9 354 aaPredicted RBP11.31□□□□□ -0.6
SF3B3-206ENST00000565990 PTDSS2Q9BVG9 487 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 MROQ9BYG7 248 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 OR11A1Q9GZK7 315 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 AKIP1Q9NQ31 210 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 MEPEQ9NQ76 525 aaPredicted RBP11.31□□□□□ -0.6
SF3B3-206ENST00000565990 MAGED1Q9Y5V3 778 aaPredicted RBP11.31□□□□□ -0.6
SF3B3-206ENST00000565990 A0A087WUU8 490 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 ISPDA4D126 451 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 M0R3G1 203 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 EIF1AYO14602 144 aaKnown RBP11.3□□□□□ -0.6
SF3B3-206ENST00000565990 TNFSF11O14788 317 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 DNPH1O43598 174 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 OR2T1O43869 369 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 TPOP07202 933 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 HNRNPCP07910 306 aaKnown RBP eCLIP11.3□□□□□ -0.6
SF3B3-206ENST00000565990 ABOP16442 354 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 CD40LGP29965 261 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 SFTPDP35247 375 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 DIO1P49895 249 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 SRYQ05066 204 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 LTBQ06643 244 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 ZNF239Q16600 458 aaKnown RBP11.3□□□□□ -0.6
SF3B3-206ENST00000565990 NSUN5P2Q63ZY6 315 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 HBMQ6B0K9 141 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 OR4C15Q8NGM1 316 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 OR10D3Q8NH80 312 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 OR2V1Q8NHB1 315 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 MFSD8Q8NHS3 518 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 SLC7A13Q8TCU3 470 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 TMEM255BQ8WV15 326 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 TMEM239Q8WW34 195 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 LIPHQ8WWY8 451 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 ACOT11Q8WXI4 607 aaPredicted RBP11.3□□□□□ -0.6
SF3B3-206ENST00000565990 TAAR8Q969N4 342 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 TP63Q9H3D4 680 aaPredicted RBP11.3□□□□□ -0.6
SF3B3-206ENST00000565990 TMEM185BQ9H7F4 350 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 FKBP14Q9NWM8 211 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 VNN3Q9NY84 501 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 PDP1Q9P0J1 537 aaPredicted RBP11.3□□□□□ -0.6
SF3B3-206ENST00000565990 FAM215AQ9Y5M1 114 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 DOCK7Q96N67 2140 aa11.3□□□□□ -0.6
SF3B3-206ENST00000565990 TRAV36DV7A0A075B6V5 113 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 A0A1W2PNR3 127 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 SH3D21A4FU49 640 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 CD8B2A6NJW9 211 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 LIPT2A6NK58 231 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 FIGNL2A6NMB9 653 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 SULT2B1O00204 365 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 FAM20BO75063 409 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 GADD45GO95257 159 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 TIMP3P35625 211 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 GGT2P36268 569 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 CA7P43166 264 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 BCAP31P51572 246 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 CTBP2P56545 445 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 RPS3AP61247 264 aaKnown RBP11.29□□□□□ -0.6
SF3B3-206ENST00000565990 CSNK2A1P68400 391 aaPredicted RBP11.29□□□□□ -0.6
SF3B3-206ENST00000565990 SLC35A1P78382 337 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 PRKCDQ05655 676 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 MRPL49Q13405 166 aaKnown RBP11.29□□□□□ -0.6
SF3B3-206ENST00000565990 C3AR1Q16581 482 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 ZNF585AQ6P3V2 769 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 PODNL1Q6PEZ8 512 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 SEM1Q6ZVN7 128 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 MBOAT2Q6ZWT7 520 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 CD163Q86VB7 1156 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 ATCAYQ86WG3 371 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 P3H2Q8IVL5 708 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 UBQLNLQ8IYU4 475 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 HS3ST5Q8IZT8 346 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 CENPSQ8N2Z9 138 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 ATG16L2Q8NAA4 619 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 OR5M9Q8NGP3 310 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 DYNC2LI1Q8TCX1 351 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 ITFG2Q969R8 447 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 CPNE4Q96A23 557 aaPredicted RBP11.29□□□□□ -0.6
SF3B3-206ENST00000565990 ZNF845Q96IR2 970 aaPredicted RBP11.29□□□□□ -0.6
SF3B3-206ENST00000565990 OR5B2Q96R09 309 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 RIBC2Q9H4K1 309 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 ACOT13Q9NPJ3 140 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 TIGARQ9NQ88 270 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 CLCF1Q9UBD9 225 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 CAMK2AQ9UQM7 478 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 TESMINQ9Y4I5 508 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 LYVE1Q9Y5Y7 322 aa11.29□□□□□ -0.6
SF3B3-206ENST00000565990 RP1L1Q8IWN7 2480 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-206ENST00000565990 TRBV4-1A0A0J9YWV2 114 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 CLCA1A8K7I4 914 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 E9PLN8 166 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 SEC14L5O43304 696 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 CXCL13O43927 109 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 BGLAPP02818 100 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 TFPIP10646 304 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 GNLYP22749 145 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 RRM2P31350 389 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 IDUAP35475 653 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 RPS5P46782 204 aaKnown RBP11.28□□□□□ -0.6
SF3B3-206ENST00000565990 EIF1AXP47813 144 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms