RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 LY6EQ16553 131 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 GUCA2BQ16661 112 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 C1orf220Q5T0J3 134 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 CES3Q6UWW8 571 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 ZNF683Q8IZ20 524 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 TTC5Q8N0Z6 440 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 IPMKQ8NFU5 416 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 OR2T34Q8NGX1 318 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 UFD1Q92890 307 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 DNAJC19Q96DA6 116 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 DTNBP1Q96EV8 351 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 C16orf45Q96MC5 204 aaPredicted RBP2.35□□□□□ -2.03
PALB2-203ENST00000565038 RIOK2Q9BVS4 552 aaKnown RBP2.35□□□□□ -2.03
PALB2-203ENST00000565038 SLCO1B3Q9NPD5 702 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 GLRX2Q9NS18 164 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 HPF1Q9NWY4 346 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 MMP17Q9ULZ9 603 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 TMCO1Q9UM00 188 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 MRPS33Q9Y291 106 aaKnown RBP2.35□□□□□ -2.03
PALB2-203ENST00000565038 POLDIP2Q9Y2S7 368 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 SCN2AQ99250 2005 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 GAKO14976 1311 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 SLC31A2O15432 143 aa2.34□□□□□ -2.03
PALB2-203ENST00000565038 POLR2DO15514 142 aaKnown RBP2.34□□□□□ -2.03
PALB2-203ENST00000565038 TBX19O60806 448 aa2.34□□□□□ -2.03
PALB2-203ENST00000565038 GNA11P29992 359 aa2.34□□□□□ -2.03
PALB2-203ENST00000565038 SMARCB1Q12824 385 aa2.34□□□□□ -2.03
PALB2-203ENST00000565038 GANABQ14697 944 aaKnown RBP2.34□□□□□ -2.03
PALB2-203ENST00000565038 SGCAQ16586 387 aa2.34□□□□□ -2.03
PALB2-203ENST00000565038 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.03
PALB2-203ENST00000565038 UBE2E3Q969T4 207 aa2.34□□□□□ -2.03
PALB2-203ENST00000565038 SENP8Q96LD8 212 aa2.34□□□□□ -2.03
PALB2-203ENST00000565038 NHEJ1Q9H9Q4 299 aaPredicted RBP2.34□□□□□ -2.03
PALB2-203ENST00000565038 UFSP2Q9NUQ7 469 aa2.34□□□□□ -2.03
PALB2-203ENST00000565038 PIPOXQ9P0Z9 390 aa2.34□□□□□ -2.03
PALB2-203ENST00000565038 ZNF835Q9Y2P0 537 aa2.34□□□□□ -2.03
PALB2-203ENST00000565038 MROH7-TTC4A0A0A0MT08 1334 aa2.34□□□□□ -2.04
PALB2-203ENST00000565038 PEX7O00628 323 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 HSD17B6O14756 317 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 KRT8P05787 483 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 MRPL3P09001 348 aaKnown RBP2.33□□□□□ -2.04
PALB2-203ENST00000565038 ZNF286BP0CG31 522 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 HSMCR30P0CW71 290 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 HSPA5P11021 654 aaKnown RBP2.33□□□□□ -2.04
PALB2-203ENST00000565038 TBPP20226 339 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 IL12AP29459 219 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 RPL13AP40429 203 aaKnown RBP2.33□□□□□ -2.04
PALB2-203ENST00000565038 UBE2AP49459 152 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 FGF8P55075 233 aaPredicted RBP2.33□□□□□ -2.04
PALB2-203ENST00000565038 SPIBQ01892 262 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 ELP6Q0PNE2 266 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 KLRB1Q12918 225 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 FZD2Q14332 565 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 DPYSL2Q16555 572 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 TMEM225Q6GV28 225 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 ZSCAN25Q6NSZ9 544 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 Q6ZR03 302 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 FNDC5Q8NAU1 212 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 OR1N2Q8NGR9 330 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 OR2G3Q8NGZ4 309 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 TRMT10AQ8TBZ6 339 aaKnown RBP2.33□□□□□ -2.04
PALB2-203ENST00000565038 ZFP90Q8TF47 636 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 BMFQ96LC9 184 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 CLCC1Q96S66 551 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 RAB33BQ9H082 229 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 RIBC2Q9H4K1 309 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 INPP5EQ9NRR6 644 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 GIN1Q9NXP7 522 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 CALYQ9NYX4 217 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 FRMPD3Q5JV73 1810 aa2.33□□□□□ -2.04
PALB2-203ENST00000565038 BAZ1BQ9UIG0 1483 aaKnown RBP2.33□□□□□ -2.04
PALB2-203ENST00000565038 PLAC8L1A1L4L8 177 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 PRSS37A4D1T9 235 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 MBLAC1A4D2B0 266 aaPredicted RBP2.32□□□□□ -2.04
PALB2-203ENST00000565038 ARPC3O15145 178 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 MED7O43513 233 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 B4GALT2O60909 372 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 PEX11AO75192 247 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 ENTPD5O75356 428 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 CTDNEP1O95476 244 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 HEXBP07686 556 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 IQCF3P0C7M6 154 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 GKN3PP0CG01 181 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 ZNF30P17039 623 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 SOX6P35712 828 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 ACAA2P42765 397 aaKnown RBP2.32□□□□□ -2.04
PALB2-203ENST00000565038 HMGCS1Q01581 520 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 ENPEPQ07075 957 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 OR5I1Q13606 314 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 LY6G6FQ5SQ64 297 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 ECHDC2Q86YB7 292 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 FAM86B1Q8N7N1 296 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 FAM133AQ8N9E0 248 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 UBALD1Q8TB05 177 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 ACTRT1Q8TDG2 376 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 THRSPQ92748 146 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 FGF14Q92915 247 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 TTC25Q96NG3 672 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 NPAS2Q99743 824 aa2.32□□□□□ -2.04
PALB2-203ENST00000565038 GBA3Q9H227 469 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms