RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 ACTC1P68032 377 aa18.76■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ACTA1P68133 377 aa18.76■□□□□ 0.59
MAP1LC3B-206ENST00000564844 CTAG1AP78358 180 aa18.76■□□□□ 0.59
MAP1LC3B-206ENST00000564844 TAF13Q15543 124 aa18.76■□□□□ 0.59
MAP1LC3B-206ENST00000564844 RPL22L1Q6P5R6 122 aaKnown RBP18.76■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ZNF546Q86UE3 836 aa18.76■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ZFP82Q8N141 532 aa18.76■□□□□ 0.59
MAP1LC3B-206ENST00000564844 CLRN3Q8NCR9 226 aa18.76■□□□□ 0.59
MAP1LC3B-206ENST00000564844 SMARCD2Q92925 531 aa18.76■□□□□ 0.59
MAP1LC3B-206ENST00000564844 PTP4A3O75365 173 aa18.76■□□□□ 0.59
MAP1LC3B-206ENST00000564844 EPCAMP16422 314 aa18.76■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ZIC1Q15915 447 aa18.76■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ERN2Q76MJ5 926 aaKnown RBP18.76■□□□□ 0.59
MAP1LC3B-206ENST00000564844 CBLN2Q8IUK8 224 aa18.76■□□□□ 0.59
MAP1LC3B-206ENST00000564844 NR4A3Q92570 626 aa18.76■□□□□ 0.59
MAP1LC3B-206ENST00000564844 MOAP1Q96BY2 351 aa18.76■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ZNF471Q9BX82 626 aaPredicted RBP18.76■□□□□ 0.59
MAP1LC3B-206ENST00000564844 MLXQ9UH92 298 aa18.76■□□□□ 0.59
MAP1LC3B-206ENST00000564844 PLCL2Q9UPR0 1127 aa18.76■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ACOT7O00154 380 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 LYPD3O95274 346 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ANXA2P07355 339 aaKnown RBP18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 NID1P14543 1247 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 LTBQ06643 244 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 RUNX2Q13950 521 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 PRRT3Q5FWE3 981 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ZNF619Q8N2I2 560 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 GATSQ8NAP1 163 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 PAWRQ96IZ0 340 aaKnown RBP18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 FARSAQ9Y285 508 aaKnown RBP18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 CTDSPLO15194 276 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 CDC123O75794 336 aaPredicted RBP18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ATG12O94817 140 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ADH5P11766 374 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 SLC6A6P31641 620 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 DUSP8Q13202 625 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ARHGAP11BQ3KRB8 267 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 PDSS1Q5T2R2 415 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ANKRD33Q7Z3H0 272 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ZNF761Q86XN6 746 aaPredicted RBP18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 FAM219AQ8IW50 185 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 TEX19Q8NA77 164 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 STARD5Q9NSY2 213 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 SLC39A1Q9NY26 324 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 DPP7Q9UHL4 492 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 KIAA1549LQ6ZVL6 1849 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 OR2T7P0C7T2 308 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 CPN1P15169 458 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 EIPR1Q53HC9 387 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 TMPRSS11FQ6ZWK6 438 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 OR2T27Q8NH04 317 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 KLHDC2Q9Y2U9 406 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ZNF281Q9Y2X9 895 aa18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 MRPS2Q9Y399 296 aaKnown RBP18.75■□□□□ 0.59
MAP1LC3B-206ENST00000564844 TBC1D3KA0A087X1G2 549 aa18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 TBC1D3FA6NER0 549 aaPredicted RBP18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 HPP00738 406 aa18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 CD53P19397 219 aa18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 GMFBP60983 142 aa18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ZNF234Q14588 700 aa18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 AKIRIN2Q53H80 203 aa18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 PRAMEF8Q5VWM4 474 aa18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 PRAMEF7Q5VXH5 474 aa18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 TBC1D3GQ6DHY5 549 aa18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 UNQ6126/PRO20091Q6UXV3 157 aa18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 TMEM52Q8NDY8 209 aa18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 LCORQ96JN0 433 aaPredicted RBP18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ADH1AP07327 375 aa18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 CT62P0C5K7 136 aa18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 CEBPBP17676 345 aa18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 RAB3AP20336 220 aa18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 DDX6P26196 483 aaKnown RBP eCLIP18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 SCGB2B2Q4G0G5 96 aa18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 OR10G6Q8NH81 332 aa18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 PPP1R14AQ96A00 147 aa18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 C10orf90Q96M02 699 aa18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 C12orf57Q99622 126 aa18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 NKX6-2Q9C056 277 aaPredicted RBP18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 TMEM231Q9H6L2 316 aa18.74■□□□□ 0.59
MAP1LC3B-206ENST00000564844 NAP1L6A6NFF2 107 aa18.73■□□□□ 0.59
MAP1LC3B-206ENST00000564844 SQSTM1Q13501 440 aa18.73■□□□□ 0.59
MAP1LC3B-206ENST00000564844 SERTAD2Q14140 314 aa18.73■□□□□ 0.59
MAP1LC3B-206ENST00000564844 FAM53BQ14153 422 aa18.73■□□□□ 0.59
MAP1LC3B-206ENST00000564844 VN1R4Q7Z5H5 301 aa18.73■□□□□ 0.59
MAP1LC3B-206ENST00000564844 HAVCR1Q96D42 359 aa18.73■□□□□ 0.59
MAP1LC3B-206ENST00000564844 PDCD10Q9BUL8 212 aa18.73■□□□□ 0.59
MAP1LC3B-206ENST00000564844 SERGEFQ9UGK8 458 aa18.73■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ZNF98A6NK75 572 aa18.73■□□□□ 0.59
MAP1LC3B-206ENST00000564844 CISD3P0C7P0 127 aa18.73■□□□□ 0.59
MAP1LC3B-206ENST00000564844 DPTQ07507 201 aa18.73■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ELFN2Q5R3F8 820 aa18.73■□□□□ 0.59
MAP1LC3B-206ENST00000564844 BAIAP2L2Q6UXY1 529 aa18.73■□□□□ 0.59
MAP1LC3B-206ENST00000564844 OR2L13Q8N349 312 aa18.73■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ADAD1Q96M93 576 aaKnown RBP18.73■□□□□ 0.59
MAP1LC3B-206ENST00000564844 POFUT1Q9H488 388 aa18.73■□□□□ 0.59
MAP1LC3B-206ENST00000564844 GMEB2Q9UKD1 530 aa18.73■□□□□ 0.59
MAP1LC3B-206ENST00000564844 CDV3Q9UKY7 258 aaKnown RBP18.73■□□□□ 0.59
MAP1LC3B-206ENST00000564844 DISC1C4P0D8 188 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 P2RX6O15547 441 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 DBIP07108 87 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms