RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 A0A0A6YYJ9 748 aa12.16□□□□□ -0.46
CDR2-204ENST00000564542 ZNF99A8MXY4 864 aaPredicted RBP12.16□□□□□ -0.46
CDR2-204ENST00000564542 B4DSR2 109 aa12.16□□□□□ -0.46
CDR2-204ENST00000564542 SLCO1B7G3V0H7 640 aa12.16□□□□□ -0.46
CDR2-204ENST00000564542 AIM2O14862 343 aa12.16□□□□□ -0.46
CDR2-204ENST00000564542 AKAP8O43823 692 aaKnown RBP12.16□□□□□ -0.46
CDR2-204ENST00000564542 IL6P05231 212 aa12.16□□□□□ -0.46
CDR2-204ENST00000564542 CAPZA2P47755 286 aa12.16□□□□□ -0.46
CDR2-204ENST00000564542 IL1RL1Q01638 556 aa12.16□□□□□ -0.46
CDR2-204ENST00000564542 STX3Q13277 289 aa12.16□□□□□ -0.46
CDR2-204ENST00000564542 KRT80Q6KB66 452 aa12.16□□□□□ -0.46
CDR2-204ENST00000564542 C6orf89Q6UWU4 347 aa12.16□□□□□ -0.46
CDR2-204ENST00000564542 C12orf54Q6X4T0 127 aa12.16□□□□□ -0.46
CDR2-204ENST00000564542 GLCCI1Q86VQ1 547 aa12.16□□□□□ -0.46
CDR2-204ENST00000564542 ZFAND2BQ8WV99 257 aa12.16□□□□□ -0.46
CDR2-204ENST00000564542 ZNF837Q96EG3 531 aaPredicted RBP12.16□□□□□ -0.46
CDR2-204ENST00000564542 TMEM19Q96HH6 336 aa12.16□□□□□ -0.46
CDR2-204ENST00000564542 OR2M2Q96R28 347 aa12.16□□□□□ -0.46
CDR2-204ENST00000564542 TPK1Q9H3S4 243 aa12.16□□□□□ -0.46
CDR2-204ENST00000564542 THUMPD1Q9NXG2 353 aaKnown RBP12.16□□□□□ -0.46
CDR2-204ENST00000564542 METRNQ9UJH8 293 aa12.16□□□□□ -0.46
CDR2-204ENST00000564542 ZNF232Q9UNY5 417 aa12.16□□□□□ -0.46
CDR2-204ENST00000564542 IFT52Q9Y366 437 aa12.16□□□□□ -0.46
CDR2-204ENST00000564542 CMAHPQ9Y471 501 aa12.16□□□□□ -0.46
CDR2-204ENST00000564542 A0A0G2JPF8 293 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 TMEM247A6NEH6 219 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 HNRNPCL2B2RXH8 293 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 HNRNPCL3B7ZW38 293 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 LYNX1G3V0Z9 82 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 M0R082 166 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 M0R233 179 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 TRAF3IP2O43734 574 aaPredicted RBP12.15□□□□□ -0.46
CDR2-204ENST00000564542 SYNGR3O43761 229 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 OR2T1O43869 369 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 HNRNPCL1O60812 293 aaKnown RBP12.15□□□□□ -0.46
CDR2-204ENST00000564542 SEC14L2O76054 403 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 ZCCHC18P0CG32 403 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 HNRNPCL4P0DMR1 293 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 LYNX1P0DP58 116 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 NR4A1P22736 598 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 CFPP27918 469 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 EVX1P49640 407 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 RUNX1T1Q06455 604 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 BST1Q10588 318 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 C1DQ13901 141 aaKnown RBP12.15□□□□□ -0.46
CDR2-204ENST00000564542 KRT71Q3SY84 523 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 ZNF311Q5JNZ3 666 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 FAM69AQ5T7M9 428 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 C5orf46Q6UWT4 87 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 DEF8Q6ZN54 512 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 TMEM123Q8N131 208 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 SEMA6DQ8NFY4 1073 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 ZNF417Q8TAU3 575 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 MRPL24Q96A35 216 aaKnown RBP12.15□□□□□ -0.46
CDR2-204ENST00000564542 ZNF587Q96SQ5 575 aaPredicted RBP12.15□□□□□ -0.46
CDR2-204ENST00000564542 TPT1P8Q9HAU6 139 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 C12orf10Q9HB07 376 aa12.15□□□□□ -0.46
CDR2-204ENST00000564542 LOC102725191A0A1B0GVB3 256 aa12.14□□□□□ -0.47
CDR2-204ENST00000564542 RGS16O15492 202 aaPredicted RBP12.14□□□□□ -0.47
CDR2-204ENST00000564542 ANP32DO95626 131 aa12.14□□□□□ -0.47
CDR2-204ENST00000564542 IDO1P14902 403 aa12.14□□□□□ -0.47
CDR2-204ENST00000564542 EPHA3P29320 983 aa12.14□□□□□ -0.47
CDR2-204ENST00000564542 HOXC5Q00444 222 aa12.14□□□□□ -0.47
CDR2-204ENST00000564542 SCGB2A2Q13296 93 aa12.14□□□□□ -0.47
CDR2-204ENST00000564542 GSG1Q2KHT4 349 aa12.14□□□□□ -0.47
CDR2-204ENST00000564542 SLC9B1Q4ZJI4 515 aa12.14□□□□□ -0.47
CDR2-204ENST00000564542 PDCD4Q53EL6 469 aaKnown RBP12.14□□□□□ -0.47
CDR2-204ENST00000564542 ELFN2Q5R3F8 820 aa12.14□□□□□ -0.47
CDR2-204ENST00000564542 ADPRHL1Q8NDY3 354 aa12.14□□□□□ -0.47
CDR2-204ENST00000564542 SLC38A4Q969I6 547 aa12.14□□□□□ -0.47
CDR2-204ENST00000564542 VPS33AQ96AX1 596 aa12.14□□□□□ -0.47
CDR2-204ENST00000564542 MRPL37Q9BZE1 423 aaKnown RBP12.14□□□□□ -0.47
CDR2-204ENST00000564542 PLA2G12AQ9BZM1 189 aa12.14□□□□□ -0.47
CDR2-204ENST00000564542 MS4A5Q9H3V2 200 aa12.14□□□□□ -0.47
CDR2-204ENST00000564542 OCEL1Q9H607 264 aa12.14□□□□□ -0.47
CDR2-204ENST00000564542 WDR55Q9H6Y2 383 aaPredicted RBP12.14□□□□□ -0.47
CDR2-204ENST00000564542 METTL17Q9H7H0 456 aaPredicted RBP12.14□□□□□ -0.47
CDR2-204ENST00000564542 B3GNT2Q9NY97 397 aa12.14□□□□□ -0.47
CDR2-204ENST00000564542 RPS6KB2Q9UBS0 482 aa12.14□□□□□ -0.47
CDR2-204ENST00000564542 TRPC5OSA6NMA1 111 aa12.13□□□□□ -0.47
CDR2-204ENST00000564542 M0R3G1 203 aa12.13□□□□□ -0.47
CDR2-204ENST00000564542 HDAC3O15379 428 aa12.13□□□□□ -0.47
CDR2-204ENST00000564542 SLC22A3O75751 556 aa12.13□□□□□ -0.47
CDR2-204ENST00000564542 VENTXO95231 258 aa12.13□□□□□ -0.47
CDR2-204ENST00000564542 HLA-HP01893 362 aa12.13□□□□□ -0.47
CDR2-204ENST00000564542 ZNF14P17017 642 aaPredicted RBP12.13□□□□□ -0.47
CDR2-204ENST00000564542 ACHEP22303 614 aa12.13□□□□□ -0.47
CDR2-204ENST00000564542 GRPRP30550 384 aa12.13□□□□□ -0.47
CDR2-204ENST00000564542 GPR6P46095 362 aaPredicted RBP12.13□□□□□ -0.47
CDR2-204ENST00000564542 MSMPQ1L6U9 139 aa12.13□□□□□ -0.47
CDR2-204ENST00000564542 GTDC1Q4AE62 458 aa12.13□□□□□ -0.47
CDR2-204ENST00000564542 PHYHD1Q5SRE7 291 aa12.13□□□□□ -0.47
CDR2-204ENST00000564542 REP15Q6BDI9 236 aa12.13□□□□□ -0.47
CDR2-204ENST00000564542 MSANTD1Q6ZTZ1 278 aa12.13□□□□□ -0.47
CDR2-204ENST00000564542 H1FNTQ75WM6 255 aaPredicted RBP12.13□□□□□ -0.47
CDR2-204ENST00000564542 ZNF627Q7L945 461 aa12.13□□□□□ -0.47
CDR2-204ENST00000564542 NET1Q7Z628 596 aaPredicted RBP12.13□□□□□ -0.47
CDR2-204ENST00000564542 UEVLDQ8IX04 471 aa12.13□□□□□ -0.47
CDR2-204ENST00000564542 C20orf196Q8IYI0 205 aa12.13□□□□□ -0.47
CDR2-204ENST00000564542 LSMEM1Q8N8F7 131 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms