RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 OR8J3Q8NGG0 315 aa17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 OR6S1Q8NH40 331 aa17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 SLC26A7Q8TE54 656 aa17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 TRMT61AQ96FX7 289 aaKnown RBP17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 SLC41A3Q96GZ6 507 aa17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 POM121Q96HA1 1249 aa17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 TMEM43Q9BTV4 400 aa17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 ASPNQ9BXN1 380 aa17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 NELFAQ9H3P2 528 aa17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 CCDC134Q9H6E4 229 aa17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 CORINQ9Y5Q5 1042 aa17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 A0A096LPE4 126 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 LOC100653049A0A140TA62 436 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 A0A1W2PPZ6 126 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 ATP6V1G2-DDX39BF2Z307 99 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 MS4A18H0YCH9 400 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 CHP2O43745 196 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 NDUFS7O75251 213 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 KRT34O76011 436 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 LYPD3O95274 346 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 LY6G6DO95868 133 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 IGHV4-39P01824 125 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 THY1P04216 161 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 HLA-DOBP13765 273 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 HOXB4P17483 251 aaPredicted RBP17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 TUBA1BP68363 451 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 TUBA4AP68366 448 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 MFSD13AQ14CX5 517 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 MAPRE2Q15555 327 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 MS4A18Q3C1V0 323 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 TUBA1AQ71U36 451 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 UEVLDQ8IX04 471 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 BCL2L2Q92843 193 aaPredicted RBP17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 BOD1Q96IK1 185 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 OR2M2Q96R28 347 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 DHRS9Q9BPW9 319 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 MRGBPQ9NV56 204 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 ARMCX1Q9P291 453 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 GDF2Q9UK05 429 aaPredicted RBP17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 ATP23Q9Y6H3 246 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 CAPN7Q9Y6W3 813 aa17.45■□□□□ 0.38
SHCBP1-203ENST00000564272 HEATR1Q9H583 2144 aaKnown RBP17.44■□□□□ 0.38
SHCBP1-203ENST00000564272 HEXAP06865 529 aa17.44■□□□□ 0.38
SHCBP1-203ENST00000564272 TTKP33981 857 aa17.44■□□□□ 0.38
SHCBP1-203ENST00000564272 POU3F1Q03052 451 aaPredicted RBP17.44■□□□□ 0.38
SHCBP1-203ENST00000564272 PMS2P3Q13401 168 aa17.44■□□□□ 0.38
SHCBP1-203ENST00000564272 TNK1Q13470 666 aa17.44■□□□□ 0.38
SHCBP1-203ENST00000564272 VEZF1Q14119 521 aa17.44■□□□□ 0.38
SHCBP1-203ENST00000564272 CLEC12BQ2HXU8 276 aa17.44■□□□□ 0.38
SHCBP1-203ENST00000564272 AGAP6Q5VW22 663 aa17.44■□□□□ 0.38
SHCBP1-203ENST00000564272 CARD17Q5XLA6 110 aa17.44■□□□□ 0.38
SHCBP1-203ENST00000564272 LINC00114Q6XXX2 140 aa17.44■□□□□ 0.38
SHCBP1-203ENST00000564272 CCDC80Q76M96 950 aa17.44■□□□□ 0.38
SHCBP1-203ENST00000564272 TMEM123Q8N131 208 aa17.44■□□□□ 0.38
SHCBP1-203ENST00000564272 DEPDC4Q8N2C3 294 aa17.44■□□□□ 0.38
SHCBP1-203ENST00000564272 GPR137CQ8N3F9 429 aa17.44■□□□□ 0.38
SHCBP1-203ENST00000564272 SCAIQ8N9R8 606 aa17.44■□□□□ 0.38
SHCBP1-203ENST00000564272 ADAMTS16Q8TE57 1224 aa17.44■□□□□ 0.38
SHCBP1-203ENST00000564272 C10orf82Q8WW14 230 aa17.44■□□□□ 0.38
SHCBP1-203ENST00000564272 SH3GL1Q99961 368 aa17.44■□□□□ 0.38
SHCBP1-203ENST00000564272 ECSITQ9BQ95 431 aa17.44■□□□□ 0.38
SHCBP1-203ENST00000564272 GPR35Q9HC97 309 aa17.44■□□□□ 0.38
SHCBP1-203ENST00000564272 OBP2BQ9NPH6 170 aa17.44■□□□□ 0.38
SHCBP1-203ENST00000564272 SLC7A7Q9UM01 511 aa17.44■□□□□ 0.38
SHCBP1-203ENST00000564272 IGHV1-18A0A0C4DH31 117 aa17.43■□□□□ 0.38
SHCBP1-203ENST00000564272 LOC102725191A0A1B0GVB3 256 aa17.43■□□□□ 0.38
SHCBP1-203ENST00000564272 AKAP8O43823 692 aaKnown RBP17.43■□□□□ 0.38
SHCBP1-203ENST00000564272 ACVR1BP36896 505 aa17.43■□□□□ 0.38
SHCBP1-203ENST00000564272 FABP6P51161 128 aa17.43■□□□□ 0.38
SHCBP1-203ENST00000564272 UBE2NP61088 152 aaKnown RBP17.43■□□□□ 0.38
SHCBP1-203ENST00000564272 ARF1P84077 181 aaKnown RBP17.43■□□□□ 0.38
SHCBP1-203ENST00000564272 PUDPQ08623 228 aa17.43■□□□□ 0.38
SHCBP1-203ENST00000564272 PHYHD1Q5SRE7 291 aa17.43■□□□□ 0.38
SHCBP1-203ENST00000564272 C1QTNF12Q5T7M4 302 aa17.43■□□□□ 0.38
SHCBP1-203ENST00000564272 C11orf71Q6IPW1 123 aa17.43■□□□□ 0.38
SHCBP1-203ENST00000564272 WDFY1Q8IWB7 410 aa17.43■□□□□ 0.38
SHCBP1-203ENST00000564272 FBXL14Q8N1E6 418 aa17.43■□□□□ 0.38
SHCBP1-203ENST00000564272 ZNF837Q96EG3 531 aaPredicted RBP17.43■□□□□ 0.38
SHCBP1-203ENST00000564272 EMC6Q9BV81 110 aa17.43■□□□□ 0.38
SHCBP1-203ENST00000564272 CACNG6Q9BXT2 260 aa17.43■□□□□ 0.38
SHCBP1-203ENST00000564272 GRIP2Q9C0E4 1043 aa17.43■□□□□ 0.38
SHCBP1-203ENST00000564272 FKRPQ9H9S5 495 aa17.43■□□□□ 0.38
SHCBP1-203ENST00000564272 MED4Q9NPJ6 270 aa17.43■□□□□ 0.38
SHCBP1-203ENST00000564272 MED29Q9NX70 200 aa17.43■□□□□ 0.38
SHCBP1-203ENST00000564272 MRPL39Q9NYK5 338 aaKnown RBP17.43■□□□□ 0.38
SHCBP1-203ENST00000564272 MOKQ9UQ07 419 aa17.43■□□□□ 0.38
SHCBP1-203ENST00000564272 ARPC4-TTLL3A0A0A6YYG9 625 aa17.42■□□□□ 0.38
SHCBP1-203ENST00000564272 TRAPPC13A5PLN9 417 aa17.42■□□□□ 0.38
SHCBP1-203ENST00000564272 RPL36A-HNRNPH2H7BZ11 118 aa17.42■□□□□ 0.38
SHCBP1-203ENST00000564272 M0R3G1 203 aa17.42■□□□□ 0.38
SHCBP1-203ENST00000564272 KPNA4O00629 521 aaPredicted RBP17.42■□□□□ 0.38
SHCBP1-203ENST00000564272 PLPP3O14495 311 aa17.42■□□□□ 0.38
SHCBP1-203ENST00000564272 SERPINI2O75830 405 aa17.42■□□□□ 0.38
SHCBP1-203ENST00000564272 TNFRSF1BP20333 461 aa17.42■□□□□ 0.38
SHCBP1-203ENST00000564272 SH3BGRP55822 239 aaPredicted RBP17.42■□□□□ 0.38
SHCBP1-203ENST00000564272 CEACAM16Q2WEN9 425 aa17.42■□□□□ 0.38
SHCBP1-203ENST00000564272 ANKRD16Q6P6B7 361 aa17.42■□□□□ 0.38
SHCBP1-203ENST00000564272 MUC15Q8N387 334 aa17.42■□□□□ 0.38
SHCBP1-203ENST00000564272 POU5F2Q8N7G0 328 aa17.42■□□□□ 0.38
SHCBP1-203ENST00000564272 PIK3C3Q8NEB9 887 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms