RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 TRMT2BQ96GJ1 504 aaKnown RBP11.64□□□□□ -0.55
COMMD4-209ENST00000564068 OR2M4Q96R27 311 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 INTS14Q96SY0 518 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 KCNJ16Q9NPI9 418 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 TNS1Q9HBL0 1735 aaKnown RBP11.64□□□□□ -0.55
COMMD4-209ENST00000564068 OR6C65A6NJZ3 312 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 IFITM5A6NNB3 132 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 PYCARD-AS1I3L0S3 204 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 RBMXL2O75526 392 aaKnown RBP11.64□□□□□ -0.55
COMMD4-209ENST00000564068 CBX7O95931 251 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 PCBP3P57721 371 aaKnown RBP11.64□□□□□ -0.55
COMMD4-209ENST00000564068 DEFB103AP81534 67 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 DUSP5Q16690 384 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 C14orf28Q4W4Y0 310 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 SPIN3Q5JUX0 258 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 LIPNQ5VXI9 398 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 CAMKMTQ7Z624 323 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 SLC35A4Q96G79 324 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 PRRT1Q99946 306 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 PRSS16Q9NQE7 514 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 CMC2Q9NRP2 79 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 COPS7AQ9UBW8 275 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 CBLCQ9ULV8 474 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 CASP8AP2Q9UKL3 1982 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 TSPAN11A1L157 253 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 B4DGG1 531 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 PVRP15151 417 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 MAGEB1P43366 347 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 MMP15P51511 669 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 SNTB1Q13884 538 aaKnown RBP11.63□□□□□ -0.55
COMMD4-209ENST00000564068 RAB30Q15771 203 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 MFSD12Q6NUT3 480 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 ADAM5Q6NVV9 412 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 ZNF836Q6ZNA1 936 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 TTLL10Q6ZVT0 673 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 ZNF687Q8N1G0 1237 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 C17orf47Q8NEP4 570 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 OR52R1Q8NGF1 315 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 OR10Z1Q8NGY1 313 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 TMED6Q8WW62 240 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 TSACCQ96A04 125 aaPredicted RBP11.63□□□□□ -0.55
COMMD4-209ENST00000564068 Q96M85 177 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 RBP7Q96R05 134 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 ZDHHC5Q9C0B5 715 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 LINC00862A6NCI5 91 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 LRIT2A6NDA9 550 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 CPMP14384 443 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 ZNF542PQ5EBM4 170 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 AWAT2Q6E213 333 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 SLC48A1Q6P1K1 146 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 ABHD17CQ6PCB6 329 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 CD300LGQ6UXG3 332 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 OR4D11Q8NGI4 311 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 TTC9Q92623 222 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 SULT4A1Q9BR01 284 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 ST6GALNAC5Q9BVH7 336 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 PARP12Q9H0J9 701 aaKnown RBP11.63□□□□□ -0.55
COMMD4-209ENST00000564068 PIGMQ9H3S5 423 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 POFUT1Q9H488 388 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 GPATCH2Q9NW75 528 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 ZNF629Q9UEG4 869 aaPredicted RBP11.63□□□□□ -0.55
COMMD4-209ENST00000564068 C17orf113A0A1B0GUU1 675 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 RPS10-NUDT3A0A1W2PQS6 291 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 MEGF11A6BM72 1044 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 BSGP35613 385 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 RPS10P46783 165 aaKnown RBP11.63□□□□□ -0.55
COMMD4-209ENST00000564068 PLEKHN1Q494U1 663 aaPredicted RBP11.63□□□□□ -0.55
COMMD4-209ENST00000564068 TRMT12Q53H54 448 aaKnown RBP11.63□□□□□ -0.55
COMMD4-209ENST00000564068 PDSS1Q5T2R2 415 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 OTPQ5XKR4 325 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 DGLUCYQ7Z3D6 616 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 OR4D9Q8NGE8 314 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 NANPQ8TBE9 248 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 ANKRD19PQ9H560 264 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 C12orf10Q9HB07 376 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 DZANK1Q9NVP4 752 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 PARPBPQ9NWS1 579 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 TAS2R5Q9NYW4 299 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 KCNIP3Q9Y2W7 256 aa11.63□□□□□ -0.55
COMMD4-209ENST00000564068 SLC16A7O60669 478 aa11.62□□□□□ -0.55
COMMD4-209ENST00000564068 CD160O95971 181 aa11.62□□□□□ -0.55
COMMD4-209ENST00000564068 HLXQ14774 488 aaPredicted RBP11.62□□□□□ -0.55
COMMD4-209ENST00000564068 KIAA0907Q7Z7F0 614 aaPredicted RBP11.62□□□□□ -0.55
COMMD4-209ENST00000564068 LHFPL5Q8TAF8 219 aa11.62□□□□□ -0.55
COMMD4-209ENST00000564068 NPRL2Q8WTW4 380 aa11.62□□□□□ -0.55
COMMD4-209ENST00000564068 SGPP1Q9BX95 441 aa11.62□□□□□ -0.55
COMMD4-209ENST00000564068 MAFFQ9ULX9 164 aa11.62□□□□□ -0.55
COMMD4-209ENST00000564068 OR5H14A6NHG9 310 aa11.62□□□□□ -0.55
COMMD4-209ENST00000564068 KDM4EB2RXH2 506 aaPredicted RBP11.62□□□□□ -0.55
COMMD4-209ENST00000564068 H7C417 338 aa11.62□□□□□ -0.55
COMMD4-209ENST00000564068 SHOXO15266 292 aa11.62□□□□□ -0.55
COMMD4-209ENST00000564068 SULT1B1O43704 296 aa11.62□□□□□ -0.55
COMMD4-209ENST00000564068 HIST1H1CP16403 213 aaKnown RBP11.62□□□□□ -0.55
COMMD4-209ENST00000564068 BCL6P41182 706 aa11.62□□□□□ -0.55
COMMD4-209ENST00000564068 S100A12P80511 92 aa11.62□□□□□ -0.55
COMMD4-209ENST00000564068 GPR18Q14330 331 aa11.62□□□□□ -0.55
COMMD4-209ENST00000564068 C3orf33Q6P1S2 294 aa11.62□□□□□ -0.55
COMMD4-209ENST00000564068 Q6ZTK2 550 aa11.62□□□□□ -0.55
COMMD4-209ENST00000564068 TMEM200AQ86VY9 491 aa11.62□□□□□ -0.55
COMMD4-209ENST00000564068 CDH26Q8IXH8 852 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms