RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 SATB2Q9UPW6 733 aa4.09□□□□□ -1.75
LINC00254-201ENST00000563416 BSNQ9UPA5 3926 aa4.09□□□□□ -1.75
LINC00254-201ENST00000563416 BOD1L1Q8NFC6 3051 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 COL6A6A6NMZ7 2263 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 GOLGA8MH3BSY2 632 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 KIF2AO00139 706 aaPredicted RBP4.08□□□□□ -1.76
LINC00254-201ENST00000563416 PRMT5O14744 637 aaPredicted RBP4.08□□□□□ -1.76
LINC00254-201ENST00000563416 TOX3O15405 576 aaPredicted RBP4.08□□□□□ -1.76
LINC00254-201ENST00000563416 RAD51CO43502 376 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 BANF1O75531 89 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 SPAG6O75602 509 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 VAPBO95292 243 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 DUS4LO95620 317 aaKnown RBP4.08□□□□□ -1.76
LINC00254-201ENST00000563416 TTC4O95801 387 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 OR56A5P0C7T3 313 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 CALCBP10092 127 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 PGAM1P18669 254 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 PDHA2P29803 388 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 CCR7P32248 378 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 PITPNBP48739 271 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 KRTAP10-5P60370 271 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 PLOD1Q02809 727 aaPredicted RBP4.08□□□□□ -1.76
LINC00254-201ENST00000563416 CKAP4Q07065 602 aaKnown RBP4.08□□□□□ -1.76
LINC00254-201ENST00000563416 C2orf54Q08AI8 447 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 ABRQ12979 859 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 ARMCX4Q5H9R4 360 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 SPANXN3Q5MJ09 141 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 CTSL3PQ5NE16 218 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 ATAD3BQ5T9A4 648 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 NKAIN2Q5VXU1 208 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 STEAP4Q687X5 459 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 DUPD1Q68J44 220 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 NEPROQ6NW34 567 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 CES3Q6UWW8 571 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 IL17RELQ6ZVW7 336 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 CENPUQ71F23 418 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 SLC22A15Q8IZD6 547 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 OR52M1Q8NGK5 317 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 ZNF519Q8TB69 540 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 LKAAEAR1Q8TD35 194 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 GATAD1Q8WUU5 269 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 SELENOMQ8WWX9 145 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 ELMO1Q92556 727 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 RFT1Q96AA3 541 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 ESAMQ96AP7 390 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 LRRC39Q96DD0 335 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 CXorf40BQ96DE9 158 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 C4orf45Q96LM5 186 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 C12orf66Q96MD2 445 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 ZNF578Q96N58 590 aaPredicted RBP4.08□□□□□ -1.76
LINC00254-201ENST00000563416 BIRC8Q96P09 236 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 EBNA1BP2Q99848 306 aaKnown RBP4.08□□□□□ -1.76
LINC00254-201ENST00000563416 PIGQQ9BRB3 760 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 NMNAT2Q9BZQ4 307 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 STRADBQ9C0K7 418 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 SIRPDQ9H106 197 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 SYNDIG1Q9H7V2 258 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 ACOXLQ9NUZ1 547 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 IMP3Q9NV31 184 aaKnown RBP4.08□□□□□ -1.76
LINC00254-201ENST00000563416 TMEM9Q9P0T7 183 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 GNPTGQ9UJJ9 305 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 PSMD13Q9UNM6 376 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 MGAT4BQ9UQ53 548 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 MRPS7Q9Y2R9 242 aaKnown RBP4.08□□□□□ -1.76
LINC00254-201ENST00000563416 HEBP2Q9Y5Z4 205 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 KALRNO60229 2985 aa4.08□□□□□ -1.76
LINC00254-201ENST00000563416 TLCD2A6NGC4 264 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 IQCF5A8MTL0 148 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 GOLGA8KD6RF30 607 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 H3BMM5 538 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 GOLGA8TH3BQL2 631 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 UBXN8O00124 270 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 PFDN6O15212 129 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 EIF3HO15372 352 aaKnown RBP eCLIP4.07□□□□□ -1.76
LINC00254-201ENST00000563416 NVLO15381 856 aaKnown RBP4.07□□□□□ -1.76
LINC00254-201ENST00000563416 NME2P1O60361 137 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 NIPSNAP2O75323 286 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 CRLF1O75462 422 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 CLN5O75503 358 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 KRT33AO76009 404 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 TNFSF15O95150 251 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 GP1BBP13224 206 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 CD9P21926 228 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 PEX19P40855 299 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 OPRL1P41146 370 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 ETV5P41161 510 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 SLC1A2P43004 574 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 TSFMP43897 325 aaKnown RBP4.07□□□□□ -1.76
LINC00254-201ENST00000563416 TNFSF10P50591 281 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 GFERP55789 205 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 PPP1CAP62136 330 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 CHIT1Q13231 466 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 GRB7Q14451 532 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 CARTPTQ16568 116 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 WHAMMP3Q1A5X7 153 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 MAJINQ3KP22 176 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 TMEM41BQ5BJD5 291 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 ZNF470Q6ECI4 717 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 KCNMB4Q86W47 210 aa4.07□□□□□ -1.76
LINC00254-201ENST00000563416 PDIK1LQ8N165 341 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms