RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-206	ENST00000562791	MEP1B	Q16820	701 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	TATDN3	Q17R31	274 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	ZNF876P	Q49A33	203 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	DUSP28	Q4G0W2	176 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	C6orf141	Q5SZD1	244 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	LRIF1	Q5T3J3	769 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	GPRC6A	Q5T6X5	926 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	MAGI3	Q5TCQ9	1506 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	DHRS7B	Q6IAN0	325 aa	Predicted RBP	4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	OR8G2P	Q6IF36	304 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	GCNT7	Q6ZNI0	430 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	CYS1	Q717R9	158 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	DPPA4	Q7L190	304 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	G2E3	Q7L622	706 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	PLPPR4	Q7Z2D5	763 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	PID1	Q7Z2X4	250 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	VTCN1	Q7Z7D3	282 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	C10orf107	Q8IVU9	208 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	ASXL1	Q8IXJ9	1541 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	GPC2	Q8N158	579 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	FAM58A	Q8N1B3	248 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	C17orf78	Q8N4C9	275 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	AQP11	Q8NBQ7	271 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	ZNF485	Q8NCK3	441 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	BPIFB6	Q8NFQ5	453 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	OR8J3	Q8NGG0	315 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	OR13D1	Q8NGV5	346 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	OR2L2	Q8NH16	312 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	RLN3	Q8WXF3	142 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	SLAMF9	Q96A28	289 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	CREB3L1	Q96BA8	519 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	LGALS12	Q96DT0	336 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	FAM120B	Q96EK7	910 aa	Known RBP	4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	SAMD8	Q96LT4	415 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	GLT1D1	Q96MS3	346 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791		Q96MT0	163 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	SPATA13	Q96N96	652 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	MCCC1	Q96RQ3	725 aa	Predicted RBP	4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	SLC22A12	Q96S37	553 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	RNF2	Q99496	336 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	KLF6	Q99612	283 aa	Predicted RBP	4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	NKX6-2	Q9C056	277 aa	Predicted RBP	4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	COMMD4	Q9H0A8	199 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	TMEM117	Q9H0C3	514 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	VCX2	Q9H322	139 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	DSN1	Q9H410	356 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	NXF3	Q9H4D5	531 aa	Known RBP	4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	AUNIP	Q9H7T9	357 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	ZNF430	Q9H8G1	570 aa	Predicted RBP	4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	SLC28A3	Q9HAS3	691 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	CACYBP	Q9HB71	228 aa	Known RBP	4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	TMEM138	Q9NPI0	162 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	C14orf105	Q9NVL8	296 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	SLCO1C1	Q9NYB5	712 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	DUX4	Q9UBX2	424 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	ZNF225	Q9UK10	706 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	ANKRD26	Q9UPS8	1709 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	DICER1	Q9UPY3	1922 aa	Known RBP	4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	SLC22A13	Q9Y226	551 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	TRAPPC4	Q9Y296	219 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	FBXO7	Q9Y3I1	522 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	TMEM184B	Q9Y519	407 aa	Predicted RBP	4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	SLCO1B1	Q9Y6L6	691 aa		4.08	□□□□□ -1.76
CHD9-206	ENST00000562791	KIF20B	Q96Q89	1820 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	KIF13A	Q9H1H9	1805 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	ARHGEF40	Q8TER5	1519 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	ABCC10	Q5T3U5	1492 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	BCL9L	Q86UU0	1499 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	NFASC	O94856	1347 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	ZNF541	Q9H0D2	1346 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	TRAV34	A0A0B4J273	112 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	ZCWPW2	A0A1B0GU75	182 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	PRSS51	A0A1B0GVH4	220 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791		A0A1W2PPV4	95 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	FABP12	A6NFH5	140 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	GLTPD2	A6NH11	291 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	TCP10L2	B9ZVM9	353 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	SLC33A1	O00400	549 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	BHLHE40	O14503	412 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	TGFB1I1	O43294	461 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	ADAM20	O43506	726 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	LCMT2	O60294	686 aa	Known RBP	4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	NME2P1	O60361	137 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	TBX19	O60806	448 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	GLRA3	O75311	464 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	RECQL5	O94762	991 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	B3GAT3	O94766	335 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	GABARAP	O95166	117 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	LALBA	P00709	142 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	SERPINA3	P01011	423 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	TGFA	P01135	160 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	IFNA21	P01568	189 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	PCCB	P05166	539 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	ERCC1	P07992	297 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	SPP1	P10451	314 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	GABRA1	P14867	456 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	SPN	P16150	400 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	DRD5	P21918	477 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	CALCR	P30988	508 aa		4.07	□□□□□ -1.76
CHD9-206	ENST00000562791	APOBEC1	P41238	236 aa	Known RBP	4.07	□□□□□ -1.76

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