RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 DNAH12Q6ZR08 3092 aa1.97□□□□□ -2.09
HDGFL3-202ENST00000562702 PRUNE2Q8WUY3 3088 aa1.97□□□□□ -2.09
HDGFL3-202ENST00000562702 MYH7P12883 1935 aa1.97□□□□□ -2.09
HDGFL3-202ENST00000562702 MYO10Q9HD67 2058 aa1.97□□□□□ -2.09
HDGFL3-202ENST00000562702 LRRK1Q38SD2 2015 aa1.96□□□□□ -2.09
HDGFL3-202ENST00000562702 ZNF236Q9UL36 1845 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 MROH5Q6ZUA9 1318 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 TTC28Q96AY4 2481 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 A0A1B0GUA9 196 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 FAM47DPA6NHR8 397 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 USP27XA6NNY8 438 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 RSPH10B2B2RC85 870 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 H0YIV9 168 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 CETN3O15182 167 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 MTX2O75431 263 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 DIRAS3O95661 229 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 TGFAP01135 160 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 PCCBP05166 539 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 CA3P07451 260 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 RSPH10BP0C881 870 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 CCDC130P13994 396 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 CYP2B6P20813 491 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 HTR1EP28566 365 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 CD1BP29016 333 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 CYLC1P35663 651 aaPredicted RBP1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 NUP62P37198 522 aaPredicted RBP1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 MDH1P40925 334 aaKnown RBP1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 FKBP1AP62942 108 aaKnown RBP1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 CCNA1P78396 465 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 CCDC173Q0VFZ6 552 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 DAZ2Q13117 558 aaKnown RBP1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 ATXN7L3Q14CW9 347 aaPredicted RBP1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 NDUFA9Q16795 377 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 HADHQ16836 314 aaKnown RBP1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 ADPRMQ3LIE5 342 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 CCDC122Q5T0U0 273 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 RIPPLY2Q5TAB7 128 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 LIPNQ5VXI9 398 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 MISPQ8IVT2 679 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 DRAXINQ8NBI3 349 aaPredicted RBP1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 TRPV1Q8NER1 839 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 OR8K3Q8NH51 312 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 SLC22A8Q8TCC7 542 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 AGR3Q8TD06 166 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 RNF139Q8WU17 664 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 FAM151AQ8WW52 585 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 OR1E3Q8WZA6 343 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 ITFG2Q969R8 447 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 FAM104AQ969W3 186 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 RAB7BQ96AH8 199 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 HPDLQ96IR7 371 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 VPS35Q96QK1 796 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 OR5B2Q96R09 309 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 ZBTB18Q99592 522 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 CDX2Q99626 313 aaPredicted RBP1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 NRTNQ99748 197 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 ERP44Q9BS26 406 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 DUSP16Q9BY84 665 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 SRXN1Q9BYN0 137 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 FAM192AQ9GZU8 254 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 PORCNQ9H237 461 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 YY1AP1Q9H869 796 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 COQ10BQ9H8M1 238 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 ACTR8Q9H981 624 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 VAT1LQ9HCJ6 419 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 NGBQ9NPG2 151 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 DAZ3Q9NR90 486 aaKnown RBP1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 RAB20Q9NX57 234 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 BTNL2Q9UIR0 455 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 PSME2Q9UL46 239 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 RAB26Q9ULW5 256 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 SPACA6W5XKT8 324 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 DOCK5Q9H7D0 1870 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 RFX7Q2KHR2 1363 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 EYSQ5T1H1 3165 aa1.96□□□□□ -2.1
HDGFL3-202ENST00000562702 UNC80Q8N2C7 3258 aa1.95□□□□□ -2.1
HDGFL3-202ENST00000562702 MYH6P13533 1939 aa1.95□□□□□ -2.1
HDGFL3-202ENST00000562702 WDR19Q8NEZ3 1342 aa1.95□□□□□ -2.1
HDGFL3-202ENST00000562702 FANCIQ9NVI1 1328 aa1.95□□□□□ -2.1
HDGFL3-202ENST00000562702 NLRC5Q86WI3 1866 aa1.95□□□□□ -2.1
HDGFL3-202ENST00000562702 A0A0G2JMZ2 1700 aa1.95□□□□□ -2.1
HDGFL3-202ENST00000562702 LAMA2P24043 3122 aaKnown RBP1.95□□□□□ -2.1
HDGFL3-202ENST00000562702 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.95□□□□□ -2.1
HDGFL3-202ENST00000562702 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.95□□□□□ -2.1
HDGFL3-202ENST00000562702 ZNF705EA8MWA4 302 aaPredicted RBP1.95□□□□□ -2.1
HDGFL3-202ENST00000562702 K7N7A8 449 aa1.95□□□□□ -2.1
HDGFL3-202ENST00000562702 POLR2DO15514 142 aaKnown RBP1.95□□□□□ -2.1
HDGFL3-202ENST00000562702 DUX1O43812 170 aa1.95□□□□□ -2.1
HDGFL3-202ENST00000562702 ERLIN1O75477 346 aa1.95□□□□□ -2.1
HDGFL3-202ENST00000562702 CNMDO75829 334 aa1.95□□□□□ -2.1
HDGFL3-202ENST00000562702 MFN2O95140 757 aa1.95□□□□□ -2.1
HDGFL3-202ENST00000562702 AK1P00568 194 aa1.95□□□□□ -2.1
HDGFL3-202ENST00000562702 AGTP01019 485 aa1.95□□□□□ -2.1
HDGFL3-202ENST00000562702 TNNI3P19429 210 aa1.95□□□□□ -2.1
HDGFL3-202ENST00000562702 FUT1P19526 365 aa1.95□□□□□ -2.1
HDGFL3-202ENST00000562702 CD9P21926 228 aa1.95□□□□□ -2.1
HDGFL3-202ENST00000562702 GALP22466 123 aa1.95□□□□□ -2.1
HDGFL3-202ENST00000562702 GLRA2P23416 452 aa1.95□□□□□ -2.1
HDGFL3-202ENST00000562702 DNAJB1P25685 340 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms