RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 TMEM68Q96MH6 324 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 ZNF607Q96SK3 696 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 A4GALTQ9NPC4 353 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 UQCC1Q9NVA1 299 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 DYRK1BQ9Y463 629 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 J3QLW9 94 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 RTCAO00442 366 aaKnown RBP12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 BCL2L11O43521 198 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 MT-ND5P03915 603 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 SFTPCP11686 197 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 ZNF19P17023 458 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 AGTR1P30556 359 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 SDHAP31040 664 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 PNLIPRP1P54315 467 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 STARD6P59095 220 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 CDK3Q00526 305 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 CCINQ13939 588 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 CST6Q15828 149 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 CDNFQ49AH0 187 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 AGBL4Q5VU57 503 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 LRRTM1Q86UE6 522 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 ZNF561Q8N587 486 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 NDC1Q9BTX1 674 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 OR52A5Q9H2C5 316 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 TMPRSS5Q9H3S3 457 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 EPHX3Q9H6B9 360 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 MED20Q9H944 212 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 HEATR5BQ9P2D3 2071 aa12.87□□□□□ -0.35
GTF3C1-203ENST00000562609 MUC22E2RYF6 1773 aaPredicted RBP12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 STATHP02808 62 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 STXBP1P61764 594 aaKnown RBP12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 TSPAN31Q12999 210 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 ATXN7L3Q14CW9 347 aaPredicted RBP12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 MPPED2Q15777 294 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 TMEM52BQ4KMG9 183 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 NUDT13Q86X67 352 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 NKAIN4Q8IVV8 208 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 AKR7LQ8NHP1 331 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 C16orf78Q8WTQ4 265 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 HIST1H2BAQ96A08 127 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 SLC25A38Q96DW6 304 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 CLCC1Q96S66 551 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 JAM3Q9BX67 310 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 TEX12Q9BXU0 123 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 SLC6A16Q9GZN6 736 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 ALX4Q9H161 411 aaPredicted RBP12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 CHMP1AQ9HD42 196 aaPredicted RBP12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 SMCO4Q9NRQ5 59 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 TAC3Q9UHF0 121 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 FEZF1A0PJY2 475 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 SLC31A2O15432 143 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 KLK1P06870 262 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 C1GALT1C1LP0DN25 315 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 P2RX1P51575 399 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 SKP2Q13309 424 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 PDE7AQ13946 482 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 C4orf46Q504U0 113 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 OR52W1Q6IF63 320 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 FAM199XQ6PEV8 388 aaPredicted RBP12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 BEST3Q8N1M1 668 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 ZNF614Q8N883 585 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 OR10H5Q8NGA6 315 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 OR1J4Q8NGS1 313 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 C1orf216Q8TAB5 229 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 ARL11Q969Q4 196 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 PGLYRP3Q96LB9 341 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 XKR8Q9H6D3 395 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 COL4A3Q01955 1670 aa12.86□□□□□ -0.35
GTF3C1-203ENST00000562609 A0A1B0GWJ7 208 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 GKN3PP0CG01 181 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 CD53P19397 219 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 AGAP20933 346 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 PTH2RP49190 550 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 CBFBQ13951 182 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 SYPL1Q16563 259 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 LRRC37A5PQ49AS3 106 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 ETV3LQ6ZN32 361 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 TMEM200AQ86VY9 491 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 GTPBP8Q8N3Z3 284 aaPredicted RBP12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 OR4A4PQ8NGN8 299 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 DUSP19Q8WTR2 217 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 C4orf36Q96KX1 117 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 EGLN1Q9GZT9 426 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 KLHL31Q9H511 634 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 MEPEQ9NQ76 525 aaPredicted RBP12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 KCNK6Q9Y257 313 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 FAM96BQ9Y3D0 163 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 TRAV1-2A0A0B4J238 106 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 IGHV2-5P01817 119 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 AKR1C3P42330 323 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 TAS2R60P59551 318 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 PGGHGQ32M88 737 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 TMEM69Q5SWH9 247 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 ZNF765Q7L2R6 523 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 FCRLAQ7L513 359 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 SSX6Q7RTT6 188 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 LSRQ86X29 649 aaPredicted RBP12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 EID2Q8N6I1 236 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 C15orf54Q8N8G6 183 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 PRRC1Q96M27 445 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms