RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 XKRYO14609 159 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 FADS2O95864 444 aaKnown RBP12.84□□□□□ -0.35
COMMD4-205ENST00000562310 F13BP05160 661 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 STSP08842 583 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 PCMT1P22061 227 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 DCKP27707 260 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 SFTPDP35247 375 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 MEOX1P50221 254 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 TNFSF10P50591 281 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 DAP3P51398 398 aaKnown RBP12.84□□□□□ -0.35
COMMD4-205ENST00000562310 SLC25A1P53007 311 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 OR2B6P58173 313 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 RAP1BP61224 184 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 RPL27P61353 136 aaKnown RBP12.84□□□□□ -0.35
COMMD4-205ENST00000562310 RAP1AP62834 184 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 CSNK2A1P68400 391 aaPredicted RBP12.84□□□□□ -0.35
COMMD4-205ENST00000562310 PLGLB1Q02325 96 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 PIGFQ07326 219 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 POU4F2Q12837 409 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 IRF3Q14653 427 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 TMEM176BQ3YBM2 270 aaPredicted RBP12.84□□□□□ -0.35
COMMD4-205ENST00000562310 ZNF766Q5HY98 468 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 SLC35D3Q5M8T2 416 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 ZNF362Q5T0B9 420 aaPredicted RBP12.84□□□□□ -0.35
COMMD4-205ENST00000562310 XAF1Q6GPH4 301 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 BORAQ6PGQ7 559 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 TMPPEQ6ZT21 453 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 HDDC2Q7Z4H3 204 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 BCDIN3DQ7Z5W3 292 aaKnown RBP12.84□□□□□ -0.35
COMMD4-205ENST00000562310 SATL1Q86VE3 508 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 SDR9C7Q8NEX9 313 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 OR4K13Q8NH42 304 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 RORBQ92753 470 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 OTULINQ96BN8 352 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 RASD2Q96D21 266 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 ZHX1-C8orf76Q96EF9 292 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 CRELD1Q96HD1 420 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 Q96M85 177 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 KLHL15Q96M94 604 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 TSPAN32Q96QS1 320 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 UBL7Q96S82 380 aaPredicted RBP12.84□□□□□ -0.35
COMMD4-205ENST00000562310 TTTY12Q9BZ98 90 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 TXNIPQ9H3M7 391 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 TRAV17A0A0B4J275 112 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 FAM183AA6NL82 134 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 C11orf98E9PRG8 122 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 SULT2B1O00204 365 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 EIF1BO60739 113 aaKnown RBP12.83□□□□□ -0.36
COMMD4-205ENST00000562310 TRAPPC6AO75865 159 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 GLSO94925 669 aaPredicted RBP12.83□□□□□ -0.36
COMMD4-205ENST00000562310 RENP00797 406 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 RFPL3SP0C7P2 107 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 MYL12AP19105 171 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 SLC2A5P22732 501 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 AHCYP23526 432 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 DIO1P49895 249 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 FOXK1P85037 733 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 EMX1Q04741 257 aaPredicted RBP12.83□□□□□ -0.36
COMMD4-205ENST00000562310 UBE2UQ5VVX9 321 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 PAQR6Q6TCH4 344 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 GALNTL5Q7Z4T8 443 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 PXKQ7Z7A4 578 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 YRDCQ86U90 279 aaKnown RBP12.83□□□□□ -0.36
COMMD4-205ENST00000562310 SLC22A16Q86VW1 577 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 ARIH2OSQ8N7S6 290 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 ZFP62Q8NB50 900 aaPredicted RBP12.83□□□□□ -0.36
COMMD4-205ENST00000562310 NPEPL1Q8NDH3 523 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 BBS1Q8NFJ9 593 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 OR52I1Q8NGK6 324 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 FAR1Q8WVX9 515 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 LGALS12Q96DT0 336 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 SMAD5Q99717 465 aaKnown RBP12.83□□□□□ -0.36
COMMD4-205ENST00000562310 JAM3Q9BX67 310 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 HES7Q9BYE0 225 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 NMNAT2Q9BZQ4 307 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 RACGAP1Q9H0H5 632 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 ACOT13Q9NPJ3 140 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 HAO2Q9NYQ3 351 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 SEC14L4Q9UDX3 406 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 EXOGQ9Y2C4 368 aaKnown RBP12.83□□□□□ -0.36
COMMD4-205ENST00000562310 EXOSC1Q9Y3B2 195 aaKnown RBP12.83□□□□□ -0.36
COMMD4-205ENST00000562310 NOX1Q9Y5S8 564 aa12.83□□□□□ -0.36
COMMD4-205ENST00000562310 TPRP12270 2363 aaKnown RBP12.83□□□□□ -0.36
COMMD4-205ENST00000562310 LOC102725191A0A1B0GVB3 256 aa12.82□□□□□ -0.36
COMMD4-205ENST00000562310 A0A1W2PNR3 127 aa12.82□□□□□ -0.36
COMMD4-205ENST00000562310 CCDC182A6NF36 153 aa12.82□□□□□ -0.36
COMMD4-205ENST00000562310 AQP7P3A6NL99 342 aa12.82□□□□□ -0.36
COMMD4-205ENST00000562310 ZNF99A8MXY4 864 aaPredicted RBP12.82□□□□□ -0.36
COMMD4-205ENST00000562310 NPIPA5E9PKD4 350 aa12.82□□□□□ -0.36
COMMD4-205ENST00000562310 POU3F2P20265 443 aaPredicted RBP12.82□□□□□ -0.36
COMMD4-205ENST00000562310 SHC1P29353 583 aa12.82□□□□□ -0.36
COMMD4-205ENST00000562310 C21orf33P30042 268 aaPredicted RBP12.82□□□□□ -0.36
COMMD4-205ENST00000562310 RPS7P62081 194 aaKnown RBP12.82□□□□□ -0.36
COMMD4-205ENST00000562310 RAB39AQ14964 217 aa12.82□□□□□ -0.36
COMMD4-205ENST00000562310 ACKR1Q16570 336 aa12.82□□□□□ -0.36
COMMD4-205ENST00000562310 KLHL12Q53G59 568 aa12.82□□□□□ -0.36
COMMD4-205ENST00000562310 MESTQ5EB52 335 aa12.82□□□□□ -0.36
COMMD4-205ENST00000562310 WIPI1Q5MNZ9 446 aaPredicted RBP12.82□□□□□ -0.36
COMMD4-205ENST00000562310 PDSS1Q5T2R2 415 aa12.82□□□□□ -0.36
COMMD4-205ENST00000562310 GTF2IRD2BQ6EKJ0 949 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms