RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 A1L4Q6 167 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 NPIPB13A6NJU9 1138 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 NPIPB4C9JG80 1138 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 KPNA4O00629 521 aaPredicted RBP8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 KLF4O43474 513 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 TRAF3IP2O43734 574 aaPredicted RBP8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 SMNDC1O75940 238 aaKnown RBP eCLIP8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 HPRP00739 348 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 HIST1H2ABP04908 130 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 IFI30P13284 250 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 NQO1P15559 274 aaKnown RBP8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 COX5AP20674 150 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 MAKP20794 623 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 PTNP21246 168 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 CBLP22681 906 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 RRM2P31350 389 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 OMPP47874 163 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 FHL1Q13642 323 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 P2RY6Q15077 328 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 SEC23BQ15437 767 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 FBXW9Q5XUX1 488 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 OR2T5Q6IEZ7 315 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 C1orf94Q6P1W5 598 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 TBPL2Q6SJ96 375 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 ZNF730Q6ZMV8 503 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 Q6ZT83 130 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 HIST3H2AQ7L7L0 130 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 LUZP2Q86TE4 346 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 GPAT4Q86UL3 456 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 NRMQ8IXM6 262 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 DMRTC2Q8IXT2 367 aaPredicted RBP8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 KDM8Q8N371 416 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 C10orf53Q8N6V4 93 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 POMGNT2Q8NAT1 580 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 OR4K5Q8NGD3 323 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 OR4C15Q8NGM1 316 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 OR2T29Q8NH02 315 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 HIST1H2ACQ93077 130 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 APH1AQ96BI3 265 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 ALPK1Q96QP1 1244 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 USB1Q9BQ65 265 aaKnown RBP8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 CHID1Q9BWS9 393 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 HDHD5Q9BXW7 423 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 LINC00470Q9BZP3 86 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 C6orf203Q9P0P8 240 aaPredicted RBP8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 MALT1Q9UDY8 824 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 TESMINQ9Y4I5 508 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 LYVE1Q9Y5Y7 322 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 UNC79Q9P2D8 2635 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 ABCA4P78363 2273 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 PDLIM1O00151 329 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 AKAP8O43823 692 aaKnown RBP8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 PIP5K1CO60331 668 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 PTP4A3O75365 173 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 ADORA3P0DMS8 318 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 HLA-DOBP13765 273 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 EDNRAP25101 427 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 SPIBQ01892 262 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 RPL18Q07020 188 aaKnown RBP8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 FAM27E3Q08E93 113 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 ITGADQ13349 1161 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 C1DQ13901 141 aaKnown RBP8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 FGD3Q5JSP0 725 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 SFRP5Q5T4F7 317 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 C1QTNF12Q5T7M4 302 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 ZNF770Q6IQ21 691 aaPredicted RBP8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 STAC2Q6ZMT1 411 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 AAED1Q7RTV5 226 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 ZER1Q7Z7L7 766 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 SPATA24Q86W54 205 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 LURAP1LQ8IV03 231 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 UEVLDQ8IX04 471 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 ZNF100Q8IYN0 542 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 LRRC75AQ8NAA5 344 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 ANKK1Q8NFD2 765 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 SLCO4A1Q96BD0 722 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 ZNF775Q96BV0 537 aaPredicted RBP8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 LRR1Q96L50 414 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 ADAD1Q96M93 576 aaKnown RBP8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 SLCO5A1Q9H2Y9 848 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 C12orf49Q9H741 205 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 YY1AP1Q9H869 796 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 KRCC1Q9NPI7 259 aaPredicted RBP8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 ARMC1Q9NVT9 282 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 PRSS50Q9UI38 385 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 GPR52Q9Y2T5 361 aa8.51□□□□□ -1.05
RABGGTA-221ENST00000561055 NBPF19A0A087WUL8 3843 aa8.5□□□□□ -1.05
RABGGTA-221ENST00000561055 EFCAB9A8MZ26 197 aa8.5□□□□□ -1.05
RABGGTA-221ENST00000561055 CENPBD1B2RD01 187 aa8.5□□□□□ -1.05
RABGGTA-221ENST00000561055 C16orf97H3BN30 126 aa8.5□□□□□ -1.05
RABGGTA-221ENST00000561055 BLOC1S5-TXNDC5H3BN57 136 aa8.5□□□□□ -1.05
RABGGTA-221ENST00000561055 RPL36A-HNRNPH2H7BZ11 118 aa8.5□□□□□ -1.05
RABGGTA-221ENST00000561055 CDC42EP2O14613 210 aa8.5□□□□□ -1.05
RABGGTA-221ENST00000561055 FKBP6O75344 327 aa8.5□□□□□ -1.05
RABGGTA-221ENST00000561055 OR6A2O95222 327 aa8.5□□□□□ -1.05
RABGGTA-221ENST00000561055 GOSR1O95249 250 aa8.5□□□□□ -1.05
RABGGTA-221ENST00000561055 CST1P01037 141 aa8.5□□□□□ -1.05
RABGGTA-221ENST00000561055 IGHMP01871 453 aa8.5□□□□□ -1.05
RABGGTA-221ENST00000561055 POU2F1P14859 743 aa8.5□□□□□ -1.05
RABGGTA-221ENST00000561055 PPP3CBP16298 524 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms