RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 AKAP8O43823 692 aaKnown RBP9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 BCL10O95999 233 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 PNPP00491 289 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 GUSBP08236 651 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 ACHEP22303 614 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 LSP1P33241 339 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 RPS5P46782 204 aaKnown RBP9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 NME5P56597 212 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 PIGFQ07326 219 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 MAD2L1BPQ15013 274 aaPredicted RBP9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 GSTA3Q16772 222 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 ALKBH6Q3KRA9 238 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 GLIPR1L2Q4G1C9 344 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 SLC9B1Q4ZJI4 515 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 SPANXN4Q5MJ08 99 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 CARD17Q5XLA6 110 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 REP15Q6BDI9 236 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 WBP2NLQ6ICG8 309 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 LRRC74BQ6ZQY2 392 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 ZNF621Q6ZSS3 439 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 VRK2Q86Y07 508 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 BPIFB2Q8N4F0 458 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 IL17RDQ8NFM7 739 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 OR52P1PQ8NH57 321 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 FAM216AQ8WUB2 273 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 RDH5Q92781 318 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 PANX1Q96RD7 426 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 SUCNR1Q9BXA5 334 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 TXLNGYQ9BZA5 131 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 MRPL37Q9BZE1 423 aaKnown RBP9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 LINC00470Q9BZP3 86 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 NELFAQ9H3P2 528 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 MTHFD2LQ9H903 347 aaPredicted RBP9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 GPR35Q9HC97 309 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 DUSP13Q9UII6 198 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 TRAV20A0A0B4J274 112 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 TMEM89A2RUT3 159 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 PRAMEF27A3QJZ7 478 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 CCDC154A6NI56 674 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 M0R3G1 203 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 FAAHO00519 579 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 TPD52L2O43399 206 aaKnown RBP9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 ZNF432O94892 652 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 HPXP02790 462 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 TFPTP0C1Z6 253 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 GAAP10253 952 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 PNMTP11086 282 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 CBLP22681 906 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 COL8A2P25067 703 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 SERPINB5P36952 375 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 LIMS1P48059 325 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 COMPP49747 757 aaPredicted RBP9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 CLNS1AP54105 237 aaKnown RBP9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 HILS1P60008 231 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 RPS23P62266 143 aaKnown RBP9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 NKPD1Q17RQ9 610 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 GSG1Q2KHT4 349 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 LIN52Q52LA3 116 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 ELFN2Q5R3F8 820 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 DEF8Q6ZN54 512 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 ZNF836Q6ZNA1 936 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 ZNF771Q7L3S4 317 aaPredicted RBP9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 EPHX4Q8IUS5 362 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 LRRC34Q8IZ02 419 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 FAM169BQ8N8A8 192 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 PIK3C3Q8NEB9 887 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 RNF217Q8TC41 542 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 MRPL24Q96A35 216 aaKnown RBP9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 BOD1Q96IK1 185 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 AKTIPQ9H8T0 292 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 ZNF275Q9NSD4 429 aaPredicted RBP9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 RPS6KB2Q9UBS0 482 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 PCDHGB1Q9Y5G3 927 aa9.03□□□□□ -0.96
CDC42BPB-207ENST00000560492 MEGF8Q7Z7M0 2845 aa9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 WDR91A4D1P6 747 aa9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 ZNF503-AS2A6NEH8 195 aa9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 E9PBE3 544 aa9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 WNT9BO14905 357 aa9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 CDC14BO60729 498 aa9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 SASH3O75995 380 aa9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 MPZL1O95297 269 aa9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 RAB36O95755 333 aa9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 HLA-HP01893 362 aa9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 C1QCP02747 245 aa9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 BCHEP06276 602 aa9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 GSNP06396 782 aa9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 NAT2P11245 290 aa9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 ANPEPP15144 967 aa9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 NQO1P15559 274 aaKnown RBP9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 NR4A1P22736 598 aa9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 PTDSS1P48651 473 aaKnown RBP9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 SEC24CP53992 1094 aa9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 MYBPC1Q00872 1141 aa9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 MVKQ03426 396 aa9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 LARS2Q15031 903 aaKnown RBP9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 CHI3L2Q15782 390 aa9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 DPY19L1Q2PZI1 675 aa9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 AWAT1Q58HT5 328 aa9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 AVPI1Q5T686 147 aa9.02□□□□□ -0.97
CDC42BPB-207ENST00000560492 ZNF813Q6ZN06 617 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms