RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 RPS19P39019 145 aaKnown RBP5.28□□□□□ -1.56
HERC1-208ENST00000560462 ATP5OP48047 213 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 CLK3P49761 638 aaKnown RBP5.28□□□□□ -1.56
HERC1-208ENST00000560462 ANXA11P50995 505 aaKnown RBP5.28□□□□□ -1.56
HERC1-208ENST00000560462 ZNF41P51814 821 aaPredicted RBP5.28□□□□□ -1.56
HERC1-208ENST00000560462 TERF1P54274 439 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 GP2P55259 537 aaKnown RBP5.28□□□□□ -1.56
HERC1-208ENST00000560462 C17orf67Q0P5P2 114 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 PCGF3Q3KNV8 242 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 ESCO2Q56NI9 601 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 UGT3A1Q6NUS8 523 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 TMEM154Q6P9G4 183 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 PXKQ7Z7A4 578 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 CPLX4Q7Z7G2 160 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 SDCCAG8Q86SQ7 713 aaPredicted RBP5.28□□□□□ -1.56
HERC1-208ENST00000560462 MARCH3Q86UD3 253 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 THOC6Q86W42 341 aaKnown RBP5.28□□□□□ -1.56
HERC1-208ENST00000560462 CPNE9Q8IYJ1 553 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 SLC9A6Q92581 669 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 NSMAFQ92636 917 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 OSBPL9Q96SU4 736 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 BPIFA3Q9BQP9 254 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 MCRIP2Q9BUT9 160 aaKnown RBP5.28□□□□□ -1.56
HERC1-208ENST00000560462 MECRQ9BV79 373 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 NAT10Q9H0A0 1025 aaKnown RBP5.28□□□□□ -1.56
HERC1-208ENST00000560462 MOV10Q9HCE1 1003 aaKnown RBP5.28□□□□□ -1.56
HERC1-208ENST00000560462 VSX1Q9NZR4 365 aaPredicted RBP5.28□□□□□ -1.56
HERC1-208ENST00000560462 CRNNQ9UBG3 495 aaPredicted RBP5.28□□□□□ -1.56
HERC1-208ENST00000560462 UPB1Q9UBR1 384 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 STEAP1Q9UHE8 339 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 TRMT6Q9UJA5 497 aaKnown RBP5.28□□□□□ -1.56
HERC1-208ENST00000560462 ZNF346Q9UL40 294 aaKnown RBP5.28□□□□□ -1.56
HERC1-208ENST00000560462 OAZ3Q9UMX2 235 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 UBE2J1Q9Y385 318 aaPredicted RBP5.28□□□□□ -1.56
HERC1-208ENST00000560462 SMAD5-AS1Q9Y6J3 95 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 IGLV3-32A0A0A0MS00 114 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 IGHV2-70DA0A0C4DH43 119 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 A0A0U1RQK1 487 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 A0A1W2PPW3 197 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 GAGE10A6NGK3 116 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 FOXE1O00358 373 aaPredicted RBP5.27□□□□□ -1.57
HERC1-208ENST00000560462 MRPL33O75394 65 aaKnown RBP5.27□□□□□ -1.57
HERC1-208ENST00000560462 DEDDO75618 318 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 RBMY1CP0DJD4 496 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 C1GALT1C1LP0DN25 315 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 NR2F6P10588 404 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 PORP16435 677 aaPredicted RBP5.27□□□□□ -1.57
HERC1-208ENST00000560462 PIK3R1P27986 724 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 GSTM5P46439 218 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 EMDP50402 254 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 TIRAPP58753 221 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 UBE2NP61088 152 aaKnown RBP5.27□□□□□ -1.57
HERC1-208ENST00000560462 FGF12P61328 243 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 PSPHP78330 225 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 PAX2Q02962 417 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 KLHL30Q0D2K2 578 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 PLPPR5Q32ZL2 321 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 TMEM176BQ3YBM2 270 aaPredicted RBP5.27□□□□□ -1.57
HERC1-208ENST00000560462 PHYHD1Q5SRE7 291 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 RGS7BPQ6MZT1 257 aaPredicted RBP5.27□□□□□ -1.57
HERC1-208ENST00000560462 CAVIN1Q6NZI2 390 aaKnown RBP5.27□□□□□ -1.57
HERC1-208ENST00000560462 KCTD18Q6PI47 426 aaPredicted RBP5.27□□□□□ -1.57
HERC1-208ENST00000560462 ZNF571Q7Z3V5 609 aaPredicted RBP5.27□□□□□ -1.57
HERC1-208ENST00000560462 LINC00523Q86TU6 105 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 LRP11Q86VZ4 500 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 VSTM4Q8IW00 320 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 ZNF101Q8IZC7 436 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 SPICQ8N5J4 248 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 ZNF483Q8TF39 744 aaPredicted RBP5.27□□□□□ -1.57
HERC1-208ENST00000560462 CCL17Q92583 94 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 PEX13Q92968 403 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 C3orf30Q96M34 536 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 RBBP8Q99708 897 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 BAG1Q99933 345 aaPredicted RBP5.27□□□□□ -1.57
HERC1-208ENST00000560462 ZNF717Q9BY31 904 aaPredicted RBP5.27□□□□□ -1.57
HERC1-208ENST00000560462 KRTAP9-2Q9BYQ4 174 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 MUC13Q9H3R2 512 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 HAUS4Q9H6D7 363 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 COQ10BQ9H8M1 238 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 WDR41Q9HAD4 459 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 PATZ1Q9HBE1 687 aaKnown RBP5.27□□□□□ -1.57
HERC1-208ENST00000560462 NOX3Q9HBY0 568 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 IARS2Q9NSE4 1012 aaKnown RBP5.27□□□□□ -1.57
HERC1-208ENST00000560462 DECR2Q9NUI1 292 aa5.27□□□□□ -1.57
HERC1-208ENST00000560462 MYEF2Q9P2K5 600 aaKnown RBP5.27□□□□□ -1.57
HERC1-208ENST00000560462 SLC25A10Q9UBX3 287 aaPredicted RBP5.27□□□□□ -1.57
HERC1-208ENST00000560462 IGKV3D-15A0A087WSY6 115 aa5.26□□□□□ -1.57
HERC1-208ENST00000560462 A0A1W2PRB8 838 aa5.26□□□□□ -1.57
HERC1-208ENST00000560462 SMTNL1A8MU46 457 aa5.26□□□□□ -1.57
HERC1-208ENST00000560462 C17orf100A8MU93 164 aa5.26□□□□□ -1.57
HERC1-208ENST00000560462 DIRC3C9JPN6 131 aa5.26□□□□□ -1.57
HERC1-208ENST00000560462 AP3D1O14617 1153 aa5.26□□□□□ -1.57
HERC1-208ENST00000560462 TRIAP1O43715 76 aa5.26□□□□□ -1.57
HERC1-208ENST00000560462 WDR47O94967 919 aa5.26□□□□□ -1.57
HERC1-208ENST00000560462 TTC4O95801 387 aa5.26□□□□□ -1.57
HERC1-208ENST00000560462 ANGPTL1O95841 491 aa5.26□□□□□ -1.57
HERC1-208ENST00000560462 SBK2P0C263 348 aa5.26□□□□□ -1.57
HERC1-208ENST00000560462 CT45A8P0DMV1 189 aa5.26□□□□□ -1.57
HERC1-208ENST00000560462 CT45A9P0DMV2 189 aa5.26□□□□□ -1.57
HERC1-208ENST00000560462 UBL4AP11441 157 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms