RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 Q5PR19 223 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 PHYHD1Q5SRE7 291 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 C8orf82Q6P1X6 216 aaPredicted RBP10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 MICU2Q8IYU8 434 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 TMEM123Q8N131 208 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 LRRC17Q8N6Y2 441 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 ADPRHL1Q8NDY3 354 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 C1orf162Q8NEQ5 155 aaPredicted RBP10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 OR6S1Q8NH40 331 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 PROX1Q92786 737 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 TXNDC15Q96J42 360 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 OR2M2Q96R28 347 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 EPYCQ99645 322 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 EMC6Q9BV81 110 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 MYLK2Q9H1R3 596 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 DLL4Q9NR61 685 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 MED29Q9NX70 200 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 MRPL39Q9NYK5 338 aaKnown RBP10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 LAMP3Q9UQV4 416 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 RCE1Q9Y256 329 aa10.2□□□□□ -0.78
RABGGTA-216ENST00000560243 A0A096LPE4 126 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 A0A1W2PPZ6 126 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 ELOVL7A1L3X0 281 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 ZNF587BE7ETH6 402 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 PLPP3O14495 311 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 SNX3O60493 162 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 SERPINI2O75830 405 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 CH25HO95992 272 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 FUT4P22083 530 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 PTH2RP49190 550 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 SLC7A2P52569 658 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 TUBA1BP68363 451 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 TUBA4AP68366 448 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 POU3F1Q03052 451 aaPredicted RBP10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 TGFBR3Q03167 851 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 PIN1Q13526 163 aaPredicted RBP10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 MFSD13AQ14CX5 517 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 ZNF74Q16587 644 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 PGGHGQ32M88 737 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 TBRG1Q3YBR2 411 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 CARD17Q5XLA6 110 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 TMEM108Q6UXF1 575 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 B3GLCTQ6Y288 498 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 DEF8Q6ZN54 512 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 TUBA1AQ71U36 451 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 NKAIN4Q8IVV8 208 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 UEVLDQ8IX04 471 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 LRRC75A-AS1Q8N1F1 130 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 PIAS4Q8N2W9 510 aaPredicted RBP10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 C17orf78Q8N4C9 275 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 SCAIQ8N9R8 606 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 OR1K1Q8NGR3 316 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 SMAP2Q8WU79 429 aaPredicted RBP10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 TMEM171Q8WVE6 324 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 RASSF5Q8WWW0 418 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 BCL2L2Q92843 193 aaPredicted RBP10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 FBXW5Q969U6 566 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 TPD52L3Q96J77 140 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 ZNF426Q9BUY5 554 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 ASPNQ9BXN1 380 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 LINC00470Q9BZP3 86 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 NELFAQ9H3P2 528 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 MEPEQ9NQ76 525 aaPredicted RBP10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 ZNF701Q9NV72 531 aaPredicted RBP10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 CISD1Q9NZ45 108 aaKnown RBP10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 BAG5Q9UL15 447 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 CORINQ9Y5Q5 1042 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 MAGED1Q9Y5V3 778 aaPredicted RBP10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 CSPG4Q6UVK1 2322 aa10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 NSD1Q96L73 2696 aaPredicted RBP10.19□□□□□ -0.78
RABGGTA-216ENST00000560243 GMNCA6NCL1 334 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 E7EQL1 145 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 C11orf98E9PRG8 122 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 M0R3G1 203 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 SLC43A1O75387 559 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 SEC14L2O76054 403 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 CD8AP01732 235 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 PTAFRP25105 342 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 GSK3BP49841 420 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 NUDT2P50583 147 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 UGT2B15P54855 530 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 CDH11P55287 796 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 PRPS1P60891 318 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 ARF1P84077 181 aaKnown RBP10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 PUDPQ08623 228 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 TTC33Q6PID6 262 aaPredicted RBP10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 SLC22A25Q6T423 547 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 KLHL17Q6TDP4 642 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 SSX8Q7RTT4 187 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 ABHD12BQ7Z5M8 362 aaPredicted RBP10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 YTHDF3Q7Z739 585 aaKnown RBP10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 VTCN1Q7Z7D3 282 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 CIARTQ8N365 385 aaPredicted RBP10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 OR5J2Q8NH18 312 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 PFN4Q8NHR9 129 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 TMEM255BQ8WV15 326 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 BOD1Q96IK1 185 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 MPP4Q96JB8 637 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 SMR3AQ99954 134 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 GSX2Q9BZM3 304 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms