RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 UCNP55089 124 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 PPIAP62937 165 aaKnown RBP10.09□□□□□ -0.79
USP3-218ENST00000560202 CSNK2BP67870 215 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 OCLNQ16625 522 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 TRIM16LQ309B1 348 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 TMEM201Q5SNT2 666 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 SLC25A30Q5SVS4 291 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 ARHGAP11AQ6P4F7 1023 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 TMPPEQ6ZT21 453 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 SLC22A16Q86VW1 577 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 RAB2BQ8WUD1 216 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 SMPDL3BQ92485 455 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 TMIGD2Q96BF3 282 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 Q96MT0 163 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 COG8Q96MW5 612 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 BCL7BQ9BQE9 202 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 KATNB1Q9BVA0 655 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 MROQ9BYG7 248 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 WDR12Q9GZL7 423 aaKnown RBP10.09□□□□□ -0.79
USP3-218ENST00000560202 CMC2Q9NRP2 79 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 SCN3BQ9NY72 215 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 TRAPPC4Q9Y296 219 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 GPR52Q9Y2T5 361 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 SLC6A5Q9Y345 797 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 ADAM18Q9Y3Q7 739 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 IER3IP1Q9Y5U9 82 aa10.09□□□□□ -0.79
USP3-218ENST00000560202 FRYQ5TBA9 3013 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 SH3D21A4FU49 640 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 GJE1A6NN92 205 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 LINC01387J3KSC0 135 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 IDH3BO43837 385 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 FAM20BO75063 409 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 ENTPD6O75354 484 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 CD14P08571 375 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 CELA3AP09093 270 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 ADORA3P0DMS8 318 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 APEHP13798 732 aaKnown RBP10.08□□□□□ -0.8
USP3-218ENST00000560202 AHCYP23526 432 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 EIF2B2P49770 351 aaKnown RBP10.08□□□□□ -0.8
USP3-218ENST00000560202 DIO1P49895 249 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 GFRA1P56159 465 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 TMPRSS3P57727 454 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 OR2B6P58173 313 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 CTXN1P60606 82 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 ERVK-25P63136 954 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 ZNF846Q147U1 533 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 ZNF362Q5T0B9 420 aaPredicted RBP10.08□□□□□ -0.8
USP3-218ENST00000560202 MEDAGQ5VYS4 303 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 H1FNTQ75WM6 255 aaPredicted RBP10.08□□□□□ -0.8
USP3-218ENST00000560202 BCDIN3DQ7Z5W3 292 aaKnown RBP10.08□□□□□ -0.8
USP3-218ENST00000560202 S100ZQ8WXG8 99 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 MIB2Q96AX9 1013 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 LRR1Q96L50 414 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 KLHL15Q96M94 604 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 MOV10Q9HCE1 1003 aaKnown RBP10.08□□□□□ -0.8
USP3-218ENST00000560202 CHST11Q9NPF2 352 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 PLCXD1Q9NUJ7 323 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 QPCTLQ9NXS2 382 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 DNAJC27Q9NZQ0 273 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 TPRKBQ9Y3C4 175 aa10.08□□□□□ -0.8
USP3-218ENST00000560202 A0A0J9YW62 118 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 RIIAD1A6NNX1 92 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 C1QTNF9BB2RNN3 333 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 PTGES3LE9PB15 166 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 C11orf98E9PRG8 122 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 MKRN2OSH3BPM6 223 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 ACOT7O00154 380 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 HAX1O00165 279 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 SULT2B1O00204 365 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 RNF13O43567 381 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 AKR7A3O95154 331 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 PMS2P2O95744 297 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 IFNGP01579 166 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 C1QTNF9P0C862 333 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 GSTT2P0CG29 244 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 GSTT2BP0CG30 244 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 EEF1B2P24534 225 aaKnown RBP10.07□□□□□ -0.8
USP3-218ENST00000560202 NUDT6P53370 316 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 CDH15P55291 814 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 GABARAPL2P60520 117 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 SLC35A1P78382 337 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 ZP4Q12836 540 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 OXA1LQ15070 435 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 TBR1Q16650 682 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 FAM122BQ7Z309 247 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 FAM109AQ8N4B1 249 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 FAM98AQ8NCA5 519 aaKnown RBP10.07□□□□□ -0.8
USP3-218ENST00000560202 ZNF540Q8NDQ6 660 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 ZNF582Q96NG8 517 aaPredicted RBP10.07□□□□□ -0.8
USP3-218ENST00000560202 FN3KQ9H479 309 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 DUSP21Q9H596 190 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 AMBNQ9NP70 447 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 B3GALT5Q9Y2C3 310 aa10.07□□□□□ -0.8
USP3-218ENST00000560202 APC2O95996 2303 aa10.06□□□□□ -0.8
USP3-218ENST00000560202 LOC400499M0QZD8 3231 aa10.06□□□□□ -0.8
USP3-218ENST00000560202 TEX13CA0A0J9YWL9 993 aa10.06□□□□□ -0.8
USP3-218ENST00000560202 KDM4EB2RXH2 506 aaPredicted RBP10.06□□□□□ -0.8
USP3-218ENST00000560202 MS4A18H0YCH9 400 aa10.06□□□□□ -0.8
USP3-218ENST00000560202 IMPA2O14732 288 aa10.06□□□□□ -0.8
USP3-218ENST00000560202 CLPXO76031 633 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms