RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 ARR3P36575 388 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 IDH3AP50213 366 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 AQP5P55064 265 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 RGS8P57771 180 aaPredicted RBP10.68□□□□□ -0.7
SPG11-219ENST00000559822 LGALS3BPQ08380 585 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 SCARB2Q14108 478 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 SQLEQ14534 574 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 EFNB3Q15768 340 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 SWT1Q5T5J6 900 aaKnown RBP10.68□□□□□ -0.7
SPG11-219ENST00000559822 CYB5R2Q6BCY4 276 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 SLC46A3Q7Z3Q1 461 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 RANBP3LQ86VV4 465 aaPredicted RBP10.68□□□□□ -0.7
SPG11-219ENST00000559822 SNX32Q86XE0 403 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 FUNDC1Q8IVP5 155 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 UEVLDQ8IX04 471 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 MSRB3Q8IXL7 192 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 KDM8Q8N371 416 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 SCAIQ8N9R8 606 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 HIPK4Q8NE63 616 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 IL17RDQ8NFM7 739 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 RNF217Q8TC41 542 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 HTRA1Q92743 480 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 TAAR8Q969N4 342 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 EBF4Q9BQW3 602 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 PIMREGQ9BSJ6 248 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 ASPNQ9BXN1 380 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 B3GAT2Q9NPZ5 323 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 TMEM160Q9NX00 188 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 VAPAQ9P0L0 249 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 B3GAT1Q9P2W7 334 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 LPAR3Q9UBY5 353 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.68□□□□□ -0.7
SPG11-219ENST00000559822 ANGPT4Q9Y264 503 aa10.68□□□□□ -0.7
SPG11-219ENST00000559822 A0A087WUJ7 227 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 IGLV1-44P01699 117 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 VIMP08670 466 aaKnown RBP10.67□□□□□ -0.7
SPG11-219ENST00000559822 OR4A8P0C604 315 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 CBR1P16152 277 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 GPX2P18283 190 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 HTR2AP28223 471 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 GZMKP49863 264 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 LSM11P83369 360 aaKnown RBP eCLIP10.67□□□□□ -0.7
SPG11-219ENST00000559822 ARF1P84077 181 aaKnown RBP10.67□□□□□ -0.7
SPG11-219ENST00000559822 MST1LQ2TV78 715 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 AGKQ53H12 422 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 PAGE3Q5JUK9 113 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 LINGO2Q7L985 606 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 LSRQ86X29 649 aaPredicted RBP10.67□□□□□ -0.7
SPG11-219ENST00000559822 ARMC8Q8IUR7 673 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 ZNF540Q8NDQ6 660 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 NUP37Q8NFH4 326 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 STON2Q8WXE9 905 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 ATP6V1G3Q96LB4 118 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 ANKRD27Q96NW4 1050 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 KCNK17Q96T54 332 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 VRK1Q99986 396 aaPredicted RBP10.67□□□□□ -0.7
SPG11-219ENST00000559822 RAB1BQ9H0U4 201 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 NELFAQ9H3P2 528 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 ZNF442Q9H7R0 627 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 CRLF2Q9HC73 371 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 GPR35Q9HC97 309 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 SLCO1B3Q9NPD5 702 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 SLAMF8Q9P0V8 285 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 KLHL14Q9P2G3 628 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 USP22Q9UPT9 525 aa10.67□□□□□ -0.7
SPG11-219ENST00000559822 IGKV1D-42A0A075B6H8 117 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 TRBV5-3A0A0A0MS03 114 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 A0A0B4J2E0 115 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 A0A1B0GX12 115 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 LOC390937A0A1W2PQ73 354 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 ZNF99A8MXY4 864 aaPredicted RBP10.66□□□□□ -0.7
SPG11-219ENST00000559822 TRAF3IP2O43734 574 aaPredicted RBP10.66□□□□□ -0.7
SPG11-219ENST00000559822 FAM157CP0CG43 387 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 CAPZA2P47755 286 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 PPOXP50336 477 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 TUBA1BP68363 451 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 TUBA4AP68366 448 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 RBBP4Q09028 425 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 OR1Q1Q15612 314 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 ADIPOQQ15848 244 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 CEACAM16Q2WEN9 425 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 VHLLQ6RSH7 139 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 TUBA1AQ71U36 451 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 C11orf65Q8NCR3 313 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 NANOS1Q8WY41 292 aaKnown RBP10.66□□□□□ -0.7
SPG11-219ENST00000559822 SLC41A3Q96GZ6 507 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 LRR1Q96L50 414 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 SORCS2Q96PQ0 1159 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 OR2M2Q96R28 347 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 TMEM43Q9BTV4 400 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 BEX2Q9BXY8 128 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 PLK3Q9H4B4 646 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 SLC52A3Q9NQ40 469 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 SEC14L4Q9UDX3 406 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 LEF1Q9UJU2 399 aaPredicted RBP10.66□□□□□ -0.7
SPG11-219ENST00000559822 TRIM33Q9UPN9 1127 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 NOX1Q9Y5S8 564 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 ARFGEF3Q5TH69 2177 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 COL6A5A8TX70 2615 aa10.66□□□□□ -0.7
SPG11-219ENST00000559822 ZNF726A6NNF4 738 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms