RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 RNF13O43567 381 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 GPX5O75715 221 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 CLPXO76031 633 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 GLCEO94923 617 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 OR6A2O95222 327 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 IMPDH2P12268 514 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 LIFP15018 202 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 TGFBR1P36897 503 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 RPL27P61353 136 aaKnown RBP11.43□□□□□ -0.58
USP3-213ENST00000559711 ACTC1P68032 377 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 ACTA1P68133 377 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 GABREP78334 506 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.43□□□□□ -0.58
USP3-213ENST00000559711 LINC01590Q5TEZ4 76 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 TIGD3Q6B0B8 471 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 H1FNTQ75WM6 255 aaPredicted RBP11.43□□□□□ -0.58
USP3-213ENST00000559711 MDGA2Q7Z553 956 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 GTPBP8Q8N3Z3 284 aaPredicted RBP11.43□□□□□ -0.58
USP3-213ENST00000559711 ARIH2OSQ8N7S6 290 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 OR10H4Q8NGA5 316 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 ZNF519Q8TB69 540 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 TBC1D15Q8TC07 691 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 SPRYD4Q8WW59 207 aaPredicted RBP11.43□□□□□ -0.58
USP3-213ENST00000559711 ZMYND19Q96E35 227 aaPredicted RBP11.43□□□□□ -0.58
USP3-213ENST00000559711 DACH2Q96NX9 599 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 CHCHD6Q9BRQ6 235 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 CENPOQ9BU64 300 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 ALG8Q9BVK2 526 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 DCSTAMPQ9H295 470 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 TXNIPQ9H3M7 391 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 FANCFQ9NPI8 374 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 IL17BQ9UHF5 180 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 STUB1Q9UNE7 303 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 SF3B6Q9Y3B4 125 aaKnown RBP11.43□□□□□ -0.58
USP3-213ENST00000559711 NOX1Q9Y5S8 564 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 ZNF292O60281 2723 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 LOC100506127A0A0U1RQW1 187 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 C11orf98E9PRG8 122 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 MS4A18H0YCH9 400 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 TM4SF5O14894 197 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 AKAP8O43823 692 aaKnown RBP11.43□□□□□ -0.58
USP3-213ENST00000559711 TRIM3O75382 744 aaPredicted RBP11.43□□□□□ -0.58
USP3-213ENST00000559711 LALBAP00709 142 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 MRPL3P09001 348 aaKnown RBP11.43□□□□□ -0.58
USP3-213ENST00000559711 OR2T7P0C7T2 308 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 AHCYP23526 432 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 DSCR4P56555 118 aaPredicted RBP11.43□□□□□ -0.58
USP3-213ENST00000559711 RPS3AP61247 264 aaKnown RBP11.43□□□□□ -0.58
USP3-213ENST00000559711 ZNF85Q03923 595 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 PUDPQ08623 228 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 OR7A5Q15622 319 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 ACKR1Q16570 336 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 DGUOKQ16854 277 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 MS4A18Q3C1V0 323 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 SOWAHCQ53LP3 525 aaPredicted RBP11.43□□□□□ -0.58
USP3-213ENST00000559711 DCAF10Q5QP82 559 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 C3orf33Q6P1S2 294 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 LINC00299Q6ZSB3 139 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 ADCK1Q86TW2 530 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 KBTBD8Q8NFY9 601 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 OR51L1Q8NGJ5 315 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 OR1J4Q8NGS1 313 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 OR2T27Q8NH04 317 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 SLC25A43Q8WUT9 341 aaPredicted RBP11.43□□□□□ -0.58
USP3-213ENST00000559711 UFD1Q92890 307 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 THOC3Q96J01 351 aaKnown RBP11.43□□□□□ -0.58
USP3-213ENST00000559711 CNN2Q99439 309 aaKnown RBP11.43□□□□□ -0.58
USP3-213ENST00000559711 RPRD1BQ9NQG5 326 aaKnown RBP11.43□□□□□ -0.58
USP3-213ENST00000559711 BABAM2Q9NXR7 383 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 ALKBH4Q9NXW9 302 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 PCDHGB7Q9Y5F8 929 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 PCSK5Q92824 1860 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 A0A1W2PQL4 384 aaPredicted RBP11.42□□□□□ -0.58
USP3-213ENST00000559711 NPIPB13A6NJU9 1138 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 NPIPB4C9JG80 1138 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 CBR3O75828 277 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 RENP00797 406 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 TFP02787 698 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 TFPIP10646 304 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 DPP4P27487 766 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 RBMS1P29558 406 aaKnown RBP11.42□□□□□ -0.58
USP3-213ENST00000559711 CAPZA2P47755 286 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 FOXK1P85037 733 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 MYBPHQ13203 477 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 SELENBP1Q13228 472 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 DYNC1I2Q13409 638 aaKnown RBP11.42□□□□□ -0.58
USP3-213ENST00000559711 GPR50Q13585 617 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 IGF2-ASQ6U949 168 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 ZNF227Q86WZ6 799 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 MARCH9Q86YJ5 346 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 GHDCQ8N2G8 530 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 IL22RA1Q8N6P7 574 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 ZNF248Q8NDW4 579 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 ATP6V1C2Q8NEY4 427 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 OR2T4Q8NH00 348 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 NXPE2Q96DL1 559 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 GNRHR2Q96P88 292 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 TBX5Q99593 518 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 ALG12Q9BV10 488 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 RNF167Q9H6Y7 350 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms