RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 NHLRC1Q6VVB1 395 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 ABHD12BQ7Z5M8 362 aaPredicted RBP12.96□□□□□ -0.33
RPL28-208ENST00000559463 WDFY1Q8IWB7 410 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 TMEM123Q8N131 208 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 OR2T12Q8NG77 320 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 OR1K1Q8NGR3 316 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 TMEM171Q8WVE6 324 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 PROX1Q92786 737 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 BOD1Q96IK1 185 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 OR2M2Q96R28 347 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 ELAC2Q9BQ52 826 aaKnown RBP12.96□□□□□ -0.33
RPL28-208ENST00000559463 PRSS27Q9BQR3 290 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 C1QTNF6Q9BXI9 259 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 LINC00470Q9BZP3 86 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 MYLK2Q9H1R3 596 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 NELFAQ9H3P2 528 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 LAMP3Q9UQV4 416 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 AMDHD2Q9Y303 409 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 OR6C65A6NJZ3 312 aa12.95□□□□□ -0.34
RPL28-208ENST00000559463 M0R1B8 84 aa12.95□□□□□ -0.34
RPL28-208ENST00000559463 PLPP3O14495 311 aa12.95□□□□□ -0.34
RPL28-208ENST00000559463 SHOX2O60902 331 aaPredicted RBP12.95□□□□□ -0.34
RPL28-208ENST00000559463 PTAFRP25105 342 aa12.95□□□□□ -0.34
RPL28-208ENST00000559463 CDH11P55287 796 aa12.95□□□□□ -0.34
RPL28-208ENST00000559463 IL1RL1Q01638 556 aa12.95□□□□□ -0.34
RPL28-208ENST00000559463 C1DQ13901 141 aaKnown RBP12.95□□□□□ -0.34
RPL28-208ENST00000559463 TBRG1Q3YBR2 411 aa12.95□□□□□ -0.34
RPL28-208ENST00000559463 LRRC23Q53EV4 343 aaPredicted RBP12.95□□□□□ -0.34
RPL28-208ENST00000559463 CYBRD1Q53TN4 286 aa12.95□□□□□ -0.34
RPL28-208ENST00000559463 C8orf82Q6P1X6 216 aaPredicted RBP12.95□□□□□ -0.34
RPL28-208ENST00000559463 KLHL17Q6TDP4 642 aa12.95□□□□□ -0.34
RPL28-208ENST00000559463 TMEM108Q6UXF1 575 aa12.95□□□□□ -0.34
RPL28-208ENST00000559463 UEVLDQ8IX04 471 aa12.95□□□□□ -0.34
RPL28-208ENST00000559463 SLC15A3Q8IY34 581 aa12.95□□□□□ -0.34
RPL28-208ENST00000559463 MICU2Q8IYU8 434 aa12.95□□□□□ -0.34
RPL28-208ENST00000559463 C10orf53Q8N6V4 93 aa12.95□□□□□ -0.34
RPL28-208ENST00000559463 SMAP2Q8WU79 429 aaPredicted RBP12.95□□□□□ -0.34
RPL28-208ENST00000559463 ASPNQ9BXN1 380 aa12.95□□□□□ -0.34
RPL28-208ENST00000559463 ZNF701Q9NV72 531 aaPredicted RBP12.95□□□□□ -0.34
RPL28-208ENST00000559463 BAG5Q9UL15 447 aa12.95□□□□□ -0.34
RPL28-208ENST00000559463 SH3GLB1Q9Y371 365 aa12.95□□□□□ -0.34
RPL28-208ENST00000559463 MAGED1Q9Y5V3 778 aaPredicted RBP12.95□□□□□ -0.34
RPL28-208ENST00000559463 OVOL3O00110 214 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 KPNA4O00629 521 aaPredicted RBP12.94□□□□□ -0.34
RPL28-208ENST00000559463 NME4O00746 187 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 ARHGEF9O43307 516 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 TMCC2O75069 709 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 SLC43A1O75387 559 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 MT-ATP6P00846 226 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 DRD4P21917 467 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 LSP1P33241 339 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 KDELR2P33947 212 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 OR1E2P47887 323 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 GYS2P54840 703 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 ROR2Q01974 943 aaKnown RBP12.94□□□□□ -0.34
RPL28-208ENST00000559463 POU3F1Q03052 451 aaPredicted RBP12.94□□□□□ -0.34
RPL28-208ENST00000559463 PUDPQ08623 228 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 PMS2P3Q13401 168 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 ZNF74Q16587 644 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 PHYHD1Q5SRE7 291 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 TTC33Q6PID6 262 aaPredicted RBP12.94□□□□□ -0.34
RPL28-208ENST00000559463 PRSS57Q6UWY2 283 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 B3GLCTQ6Y288 498 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 DEF8Q6ZN54 512 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 ARPINQ7Z6K5 226 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 YTHDF3Q7Z739 585 aaKnown RBP12.94□□□□□ -0.34
RPL28-208ENST00000559463 PIAS4Q8N2W9 510 aaPredicted RBP12.94□□□□□ -0.34
RPL28-208ENST00000559463 OR5J2Q8NH18 312 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 BCL2L2Q92843 193 aaPredicted RBP12.94□□□□□ -0.34
RPL28-208ENST00000559463 ZNF837Q96EG3 531 aaPredicted RBP12.94□□□□□ -0.34
RPL28-208ENST00000559463 TXNDC15Q96J42 360 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 MPP4Q96JB8 637 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 FAM107BQ9H098 131 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 CXorf56Q9H5V9 222 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 GPR35Q9HC97 309 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 MED29Q9NX70 200 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 CISD1Q9NZ45 108 aaKnown RBP12.94□□□□□ -0.34
RPL28-208ENST00000559463 MGAT4BQ9UQ53 548 aa12.94□□□□□ -0.34
RPL28-208ENST00000559463 CSPG4Q6UVK1 2322 aa12.93□□□□□ -0.34
RPL28-208ENST00000559463 A0A096LPE4 126 aa12.93□□□□□ -0.34
RPL28-208ENST00000559463 A0A1W2PPZ6 126 aa12.93□□□□□ -0.34
RPL28-208ENST00000559463 ELOVL7A1L3X0 281 aa12.93□□□□□ -0.34
RPL28-208ENST00000559463 E7EQL1 145 aa12.93□□□□□ -0.34
RPL28-208ENST00000559463 RPL36A-HNRNPH2H7BZ11 118 aa12.93□□□□□ -0.34
RPL28-208ENST00000559463 AKAP8O43823 692 aaKnown RBP12.93□□□□□ -0.34
RPL28-208ENST00000559463 SNX3O60493 162 aa12.93□□□□□ -0.34
RPL28-208ENST00000559463 CH25HO95992 272 aa12.93□□□□□ -0.34
RPL28-208ENST00000559463 IFNA14P01570 189 aa12.93□□□□□ -0.34
RPL28-208ENST00000559463 CD8AP01732 235 aa12.93□□□□□ -0.34
RPL28-208ENST00000559463 NUDT2P50583 147 aa12.93□□□□□ -0.34
RPL28-208ENST00000559463 SLC7A2P52569 658 aa12.93□□□□□ -0.34
RPL28-208ENST00000559463 PRPS1P60891 318 aa12.93□□□□□ -0.34
RPL28-208ENST00000559463 RPS4XP62701 263 aaKnown RBP12.93□□□□□ -0.34
RPL28-208ENST00000559463 LIPEQ05469 1076 aa12.93□□□□□ -0.34
RPL28-208ENST00000559463 HMBOX1Q6NT76 420 aa12.93□□□□□ -0.34
RPL28-208ENST00000559463 SLC22A25Q6T423 547 aa12.93□□□□□ -0.34
RPL28-208ENST00000559463 KLHL24Q6TFL4 600 aa12.93□□□□□ -0.34
RPL28-208ENST00000559463 HACD2Q6Y1H2 254 aa12.93□□□□□ -0.34
RPL28-208ENST00000559463 SLC46A3Q7Z3Q1 461 aa12.93□□□□□ -0.34
RPL28-208ENST00000559463 PXKQ7Z7A4 578 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms