RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 CCL7P80098 99 aa10.24□□□□□ -0.77
CLPX-204ENST00000559152 C17orf67Q0P5P2 114 aa10.24□□□□□ -0.77
CLPX-204ENST00000559152 HLA-BQ31612 363 aa10.24□□□□□ -0.77
CLPX-204ENST00000559152 HACD4Q5VWC8 232 aa10.24□□□□□ -0.77
CLPX-204ENST00000559152 TSSK4Q6SA08 328 aa10.24□□□□□ -0.77
CLPX-204ENST00000559152 LSRQ86X29 649 aaPredicted RBP10.24□□□□□ -0.77
CLPX-204ENST00000559152 CELF2-AS1Q8N7Q2 184 aa10.24□□□□□ -0.77
CLPX-204ENST00000559152 SCAIQ8N9R8 606 aa10.24□□□□□ -0.77
CLPX-204ENST00000559152 NLGN4YQ8NFZ3 816 aaPredicted RBP10.24□□□□□ -0.77
CLPX-204ENST00000559152 ENKURQ8TC29 256 aa10.24□□□□□ -0.77
CLPX-204ENST00000559152 ZPLD1Q8TCW7 415 aa10.24□□□□□ -0.77
CLPX-204ENST00000559152 GPR119Q8TDV5 335 aa10.24□□□□□ -0.77
CLPX-204ENST00000559152 ZNRF4Q8WWF5 429 aa10.24□□□□□ -0.77
CLPX-204ENST00000559152 ADAD1Q96M93 576 aaKnown RBP10.24□□□□□ -0.77
CLPX-204ENST00000559152 PPIL3Q9H2H8 161 aaKnown RBP10.24□□□□□ -0.77
CLPX-204ENST00000559152 ZCCHC4Q9H5U6 513 aa10.24□□□□□ -0.77
CLPX-204ENST00000559152 ACOXLQ9NUZ1 547 aa10.24□□□□□ -0.77
CLPX-204ENST00000559152 TAS2R10Q9NYW0 307 aa10.24□□□□□ -0.77
CLPX-204ENST00000559152 RABL2AQ9UBK7 228 aaPredicted RBP10.24□□□□□ -0.77
CLPX-204ENST00000559152 C19orf25Q9UFG5 118 aaPredicted RBP10.24□□□□□ -0.77
CLPX-204ENST00000559152 PAIP2BQ9ULR5 123 aaKnown RBP10.24□□□□□ -0.77
CLPX-204ENST00000559152 RABL2BQ9UNT1 228 aa10.24□□□□□ -0.77
CLPX-204ENST00000559152 RASD1Q9Y272 281 aa10.24□□□□□ -0.77
CLPX-204ENST00000559152 ZNF281Q9Y2X9 895 aa10.24□□□□□ -0.77
CLPX-204ENST00000559152 TMED7Q9Y3B3 224 aa10.24□□□□□ -0.77
CLPX-204ENST00000559152 SPTBP11277 2137 aa10.24□□□□□ -0.77
CLPX-204ENST00000559152 WDR87Q6ZQQ6 2873 aa10.24□□□□□ -0.77
CLPX-204ENST00000559152 NCOR1O75376 2440 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 ARPC4-TTLL3A0A0A6YYG9 625 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 IGHV5-10-1A0A0J9YXX1 117 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 A0A1W2PQM1 296 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 DVL2O14641 736 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 KHNYNO15037 678 aaKnown RBP10.23□□□□□ -0.77
CLPX-204ENST00000559152 KRT8P05787 483 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 TRAPPC2P0DI81 140 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 TRAPPC2BP0DI82 140 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 THBS2P35442 1172 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 CASP3P42574 277 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 TMED10P49755 219 aaKnown RBP10.23□□□□□ -0.77
CLPX-204ENST00000559152 EMP2P54851 167 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 EGR3Q06889 387 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 DBPQ10586 325 aaPredicted RBP10.23□□□□□ -0.77
CLPX-204ENST00000559152 CBX3Q13185 183 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 MFSD13AQ14CX5 517 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 SF3A2Q15428 464 aaKnown RBP10.23□□□□□ -0.77
CLPX-204ENST00000559152 HSD17B12Q53GQ0 312 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 ZNF684Q5T5D7 378 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 UNQ9370/PRO34162Q6UXP9 181 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 TMPRSS9Q7Z410 1059 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 NR2C2APQ86WQ0 139 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 PPP1R3BQ86XI6 285 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 RDH10Q8IZV5 341 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 GHDCQ8N2G8 530 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 RFLNBQ8N5W9 214 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 RPS4Y2Q8TD47 263 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 DUSP19Q8WTR2 217 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 ST8SIA1Q92185 356 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 ZC3HAV1LQ96H79 300 aaKnown RBP10.23□□□□□ -0.77
CLPX-204ENST00000559152 KLHL15Q96M94 604 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 CMTM3Q96MX0 182 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 C11orf54Q9H0W9 315 aaPredicted RBP10.23□□□□□ -0.77
CLPX-204ENST00000559152 INIPQ9NRY2 104 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 ZNF346Q9UL40 294 aaKnown RBP10.23□□□□□ -0.77
CLPX-204ENST00000559152 COPS3Q9UNS2 423 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 PCDH15Q96QU1 1955 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 MYO15AQ9UKN7 3530 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 VSTM2BA6NLU5 285 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 NPIPB7O75200 414 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 AHSA1O95433 338 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 PRKCAP17252 672 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 MAPK3P27361 379 aaPredicted RBP10.23□□□□□ -0.77
CLPX-204ENST00000559152 MAP2K3P46734 347 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 PITPNBP48739 271 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 MAP2K6P52564 334 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 PITPNAQ00169 270 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 SELENBP1Q13228 472 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 TOMM34Q15785 309 aaPredicted RBP10.23□□□□□ -0.77
CLPX-204ENST00000559152 MESTQ5EB52 335 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 EEF1A1P5Q5VTE0 462 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 C1orf140Q5VVS0 124 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 BAIAP2L2Q6UXY1 529 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 SHISA6Q6ZSJ9 500 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 TIGD4Q8IY51 512 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 SAMD12Q8N8I0 201 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 APCDD1LQ8NCL9 501 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 NFAM1Q8NET5 270 aaPredicted RBP10.23□□□□□ -0.77
CLPX-204ENST00000559152 TTC9Q92623 222 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 KCNJ15Q99712 375 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 MRI1Q9BV20 369 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 WDR76Q9H967 626 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 MARCH7Q9H992 704 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 SRA1Q9HD15 236 aaKnown RBP10.23□□□□□ -0.77
CLPX-204ENST00000559152 RBFOX1Q9NWB1 397 aaKnown RBP10.23□□□□□ -0.77
CLPX-204ENST00000559152 TAS2R5Q9NYW4 299 aa10.23□□□□□ -0.77
CLPX-204ENST00000559152 A0A0G2JK05 382 aa10.22□□□□□ -0.77
CLPX-204ENST00000559152 LY6G6EA0A0G2JKS1 128 aa10.22□□□□□ -0.77
CLPX-204ENST00000559152 LINC00854A0A1B0GVQ3 168 aa10.22□□□□□ -0.77
CLPX-204ENST00000559152 ANKUB1A6NFN9 424 aa10.22□□□□□ -0.77
CLPX-204ENST00000559152 SSX4O60224 188 aa10.22□□□□□ -0.77
CLPX-204ENST00000559152 GMFGO60234 142 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms