RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 CACYBPQ9HB71 228 aaKnown RBP6.44□□□□□ -1.38
SPG11-213ENST00000558988 POLE3Q9NRF9 147 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 SLC6A13Q9NSD5 602 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 ASB6Q9NWX5 421 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 ADPRHL2Q9NX46 363 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 CISD1Q9NZ45 108 aaKnown RBP6.44□□□□□ -1.38
SPG11-213ENST00000558988 NPAP1Q9NZP6 1156 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 TMEM181Q9P2C4 612 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 BTNL2Q9UIR0 455 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 ATP23Q9Y6H3 246 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 CSPG4Q6UVK1 2322 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 FN1P02751 2386 aaKnown RBP6.43□□□□□ -1.38
SPG11-213ENST00000558988 CFAP73A6NFT4 308 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 AGAP5A6NIR3 686 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 ZNF716A6NP11 495 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 SHISA9B4DS77 424 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 GPR171O14626 319 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 TPD52L2O43399 206 aaKnown RBP6.43□□□□□ -1.38
SPG11-213ENST00000558988 FRS3O43559 492 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 SSX4O60224 188 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 SLC22A3O75751 556 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 KRT33AO76009 404 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 SNUPNO95149 360 aaKnown RBP6.43□□□□□ -1.38
SPG11-213ENST00000558988 KRT75O95678 551 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 PMS2P2O95744 297 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 IGHV4-39P01824 125 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 COX5AP20674 150 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 CXCR1P25024 350 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 NUDT6P53370 316 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 SLC35A1P78382 337 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 HOXC5Q00444 222 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 IL1RL1Q01638 556 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 LSAMPQ13449 338 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 CEACAM7Q14002 265 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 OR7A5Q15622 319 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 PGGHGQ32M88 737 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 SLC9B1Q4ZJI4 515 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 TIMM23BQ5SRD1 257 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 OTUD3Q5T2D3 398 aaPredicted RBP6.43□□□□□ -1.38
SPG11-213ENST00000558988 ATG16L1Q676U5 607 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 KLHL24Q6TFL4 600 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 ZNF836Q6ZNA1 936 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 AAED1Q7RTV5 226 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 LRRC34Q8IZ02 419 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 OR9I1Q8NGQ6 314 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 OR52P1PQ8NH57 321 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 VPS33AQ96AX1 596 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 NAA11Q9BSU3 229 aaPredicted RBP6.43□□□□□ -1.38
SPG11-213ENST00000558988 JAM3Q9BX67 310 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 CACNG6Q9BXT2 260 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 TRIM2Q9C040 744 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 SLCO5A1Q9H2Y9 848 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 MSL2Q9HCI7 577 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 YAE1D1Q9NRH1 226 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 ZNF701Q9NV72 531 aaPredicted RBP6.43□□□□□ -1.38
SPG11-213ENST00000558988 FAIMQ9NVQ4 179 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 THAP1Q9NVV9 213 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 P2RX2Q9UBL9 471 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 OSGIN1Q9UJX0 560 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 HDGFL3Q9Y3E1 203 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 GPR45Q9Y5Y3 372 aa6.43□□□□□ -1.38
SPG11-213ENST00000558988 ABCA2Q9BZC7 2435 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 IGKV3D-15A0A087WSY6 115 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 TMEM247A6NEH6 219 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 NR5A2O00482 541 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 KLF11O14901 512 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 DBIP07108 87 aaKnown RBP6.42□□□□□ -1.38
SPG11-213ENST00000558988 DANCRP0C864 163 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 PRG2P13727 222 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 IDO1P14902 403 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 CBLP22681 906 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 IDUAP35475 653 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 HTR3AP46098 478 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 FABP6P51161 128 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 CRISP3P54108 245 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 DSTNP60981 165 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 COPZ1P61923 177 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 LGALS3BPQ08380 585 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 DMTNQ08495 405 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 EPS8Q12929 822 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 CARTPTQ16568 116 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 LIN52Q52LA3 116 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 TSPO2Q5TGU0 170 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 SLC2A7Q6PXP3 512 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 KLHL17Q6TDP4 642 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 TMEM108Q6UXF1 575 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 B3GLCTQ6Y288 498 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 LRRC74BQ6ZQY2 392 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 CROCCP2Q86T23 111 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 CMIPQ8IY22 773 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 TMEM99Q8N816 258 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 IGFBPL1Q8WX77 278 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 SLC25A36Q96CQ1 311 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 TMEM19Q96HH6 336 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 ITCHQ96J02 903 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 OR52B2Q96RD2 323 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 TRAF4Q9BUZ4 470 aaPredicted RBP6.42□□□□□ -1.38
SPG11-213ENST00000558988 TAPBPLQ9BX59 468 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 REG4Q9BYZ8 158 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 RMND5AQ9H871 391 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms