RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 EFR3AQ14156 821 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 TSC22D1Q15714 1073 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 CTU2Q2VPK5 515 aaKnown RBP3.77□□□□□ -1.81
SPG11-211ENST00000558561 ARHGAP11BQ3KRB8 267 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 GLIPR1L2Q4G1C9 344 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 AGKQ53H12 422 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 NHSL2Q5HYW2 709 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 DCST2Q5T1A1 773 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 SAXO2Q658L1 398 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 ATG16L1Q676U5 607 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 HEPHL1Q6MZM0 1159 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 XKRXQ6PP77 449 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 ZNF474Q6S9Z5 364 aaPredicted RBP3.77□□□□□ -1.81
SPG11-211ENST00000558561 DLEU7Q6UYE1 221 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 B3GNT6Q6ZMB0 384 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 MEX3BQ6ZN04 569 aaKnown RBP3.77□□□□□ -1.81
SPG11-211ENST00000558561 FRRS1Q6ZNA5 592 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 RGS9BPQ6ZS82 235 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 SPATA19Q7Z5L4 167 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 CAMKMTQ7Z624 323 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 LUZP2Q86TE4 346 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 VRK2Q86Y07 508 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 UEVLDQ8IX04 471 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 MCEMP1Q8IX19 187 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 ZNF614Q8N883 585 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 COX18Q8N8Q8 333 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 CDRT4Q8N9R6 151 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 ACBD4Q8NC06 268 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 OR4K17Q8NGC6 315 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 GOT1L1Q8NHS2 421 aaPredicted RBP3.77□□□□□ -1.81
SPG11-211ENST00000558561 FNDC9Q8TBE3 224 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 ZFP90Q8TF47 636 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 WIPF2Q8TF74 440 aaPredicted RBP3.77□□□□□ -1.81
SPG11-211ENST00000558561 CA5BP1Q8WTZ4 195 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 PHF10Q8WUB8 498 aaKnown RBP3.77□□□□□ -1.81
SPG11-211ENST00000558561 RND1Q92730 232 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 GTF2H4Q92759 462 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 MAL2Q969L2 176 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 TESCQ96BS2 214 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 ROPN1LQ96C74 230 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 ERP27Q96DN0 273 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 STARD4Q96DR4 205 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 SLC35G5Q96KT7 338 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 RNF145Q96MT1 663 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 SFXN2Q96NB2 322 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 CCDC115Q96NT0 180 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 SECISBP2Q96T21 854 aaKnown RBP3.77□□□□□ -1.81
SPG11-211ENST00000558561 SLC35A5Q9BS91 424 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 THUMPD3Q9BV44 507 aaKnown RBP3.77□□□□□ -1.81
SPG11-211ENST00000558561 SRXN1Q9BYN0 137 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 STMN4Q9H169 189 aaPredicted RBP3.77□□□□□ -1.81
SPG11-211ENST00000558561 SLC38A1Q9H2H9 487 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 ZNF385DQ9H6B1 395 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 CHODLQ9H9P2 273 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 Q9N2J8 555 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 NRIP3Q9NQ35 241 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 INTS9Q9NV88 658 aaKnown RBP3.77□□□□□ -1.81
SPG11-211ENST00000558561 MED17Q9NVC6 651 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 FAM120CQ9NX05 1096 aaKnown RBP3.77□□□□□ -1.81
SPG11-211ENST00000558561 QPCTLQ9NXS2 382 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 CCDC167Q9P0B6 97 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 VAPAQ9P0L0 249 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 KIF17Q9P2E2 1029 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 BTNL2Q9UIR0 455 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 ICAM5Q9UMF0 924 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 HEATR1Q9H583 2144 aaKnown RBP3.77□□□□□ -1.81
SPG11-211ENST00000558561 TACC2O95359 2948 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 HRNRQ86YZ3 2850 aaPredicted RBP3.77□□□□□ -1.81
SPG11-211ENST00000558561 AKAP9Q99996 3911 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 CADP27708 2225 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 UNC79Q9P2D8 2635 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 CSMD2Q7Z408 3487 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 ADGRG4Q8IZF6 3080 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 UQCRHLA0A096LP55 91 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 IGLV3-32A0A0A0MS00 114 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 SYNDIG1LA6NDD5 238 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 SERINC4A6NH21 518 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 FBP2O00757 339 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 TNFSF11O14788 317 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 BCKDKO14874 412 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 HCRTR2O43614 444 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 EDF1O60869 148 aaKnown RBP3.76□□□□□ -1.81
SPG11-211ENST00000558561 TNFSF13O75888 250 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 RCBTB2O95199 551 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 H6PDO95479 791 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 CGAP01215 116 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 TFPTP0C1Z6 253 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 UBTFL6P0CB48 400 aaPredicted RBP3.76□□□□□ -1.81
SPG11-211ENST00000558561 NCF2P19878 526 aaPredicted RBP3.76□□□□□ -1.81
SPG11-211ENST00000558561 PTNP21246 168 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 SFTPDP35247 375 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 KRT20P35900 424 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 PGM1P36871 562 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 ACAA2P42765 397 aaKnown RBP3.76□□□□□ -1.81
SPG11-211ENST00000558561 SMSP52788 366 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 SIRPAP78324 504 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 FOXF1Q12946 379 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 BNIP2Q12982 314 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 ZNF141Q15928 474 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms