RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 GPR160Q9UJ42 338 aa15.28■□□□□ 0.04
TSPAN3-204ENST00000558394 ZNF503-AS2A6NEH8 195 aa15.27■□□□□ 0.04
TSPAN3-204ENST00000558394 ZNF99A8MXY4 864 aaPredicted RBP15.27■□□□□ 0.04
TSPAN3-204ENST00000558394 AKAP8O43823 692 aaKnown RBP15.27■□□□□ 0.04
TSPAN3-204ENST00000558394 DBIP07108 87 aaKnown RBP15.27■□□□□ 0.04
TSPAN3-204ENST00000558394 TFPTP0C1Z6 253 aa15.27■□□□□ 0.04
TSPAN3-204ENST00000558394 NAT2P11245 290 aa15.27■□□□□ 0.04
TSPAN3-204ENST00000558394 GATA3P23771 443 aa15.27■□□□□ 0.04
TSPAN3-204ENST00000558394 SELENOVP59797 346 aa15.27■□□□□ 0.04
TSPAN3-204ENST00000558394 MVKQ03426 396 aa15.27■□□□□ 0.04
TSPAN3-204ENST00000558394 ZP4Q12836 540 aa15.27■□□□□ 0.04
TSPAN3-204ENST00000558394 NKPD1Q17RQ9 610 aa15.27■□□□□ 0.04
TSPAN3-204ENST00000558394 WHAMMP3Q1A5X7 153 aa15.27■□□□□ 0.04
TSPAN3-204ENST00000558394 SAXO2Q658L1 398 aa15.27■□□□□ 0.04
TSPAN3-204ENST00000558394 WBP2NLQ6ICG8 309 aa15.27■□□□□ 0.04
TSPAN3-204ENST00000558394 PEX5LQ8IYB4 626 aa15.27■□□□□ 0.04
TSPAN3-204ENST00000558394 KDM8Q8N371 416 aa15.27■□□□□ 0.04
TSPAN3-204ENST00000558394 PIK3C3Q8NEB9 887 aa15.27■□□□□ 0.04
TSPAN3-204ENST00000558394 KIF18AQ8NI77 898 aa15.27■□□□□ 0.04
TSPAN3-204ENST00000558394 TRNT1Q96Q11 434 aaKnown RBP15.27■□□□□ 0.04
TSPAN3-204ENST00000558394 MTHFD2LQ9H903 347 aaPredicted RBP15.27■□□□□ 0.04
TSPAN3-204ENST00000558394 NOP53Q9NZM5 478 aaKnown RBP15.27■□□□□ 0.04
TSPAN3-204ENST00000558394 PRDM4Q9UKN5 801 aa15.27■□□□□ 0.04
TSPAN3-204ENST00000558394 FZR1Q9UM11 496 aa15.27■□□□□ 0.04
TSPAN3-204ENST00000558394 A0A096LPI6 279 aa15.26■□□□□ 0.03
TSPAN3-204ENST00000558394 PRSS51A0A1B0GVH4 220 aa15.26■□□□□ 0.03
TSPAN3-204ENST00000558394 CDC14BO60729 498 aa15.26■□□□□ 0.03
TSPAN3-204ENST00000558394 SEC14L2O76054 403 aa15.26■□□□□ 0.03
TSPAN3-204ENST00000558394 HLA-HP01893 362 aa15.26■□□□□ 0.03
TSPAN3-204ENST00000558394 KRT4P19013 534 aa15.26■□□□□ 0.03
TSPAN3-204ENST00000558394 NCF2P19878 526 aaPredicted RBP15.26■□□□□ 0.03
TSPAN3-204ENST00000558394 RAD52P43351 418 aa15.26■□□□□ 0.03
TSPAN3-204ENST00000558394 TEKQ02763 1124 aa15.26■□□□□ 0.03
TSPAN3-204ENST00000558394 SYPL1Q16563 259 aa15.26■□□□□ 0.03
TSPAN3-204ENST00000558394 MSMPQ1L6U9 139 aa15.26■□□□□ 0.03
TSPAN3-204ENST00000558394 MMEL1Q495T6 779 aa15.26■□□□□ 0.03
TSPAN3-204ENST00000558394 AVPI1Q5T686 147 aa15.26■□□□□ 0.03
TSPAN3-204ENST00000558394 LRRC74BQ6ZQY2 392 aa15.26■□□□□ 0.03
TSPAN3-204ENST00000558394 ANKFN1Q8N957 763 aa15.26■□□□□ 0.03
TSPAN3-204ENST00000558394 NOA1Q8NC60 698 aaKnown RBP15.26■□□□□ 0.03
TSPAN3-204ENST00000558394 OR8J2Q8NGG1 315 aa15.26■□□□□ 0.03
TSPAN3-204ENST00000558394 NEURL3Q96EH8 262 aa15.26■□□□□ 0.03
TSPAN3-204ENST00000558394 MS4A3Q96HJ5 214 aa15.26■□□□□ 0.03
TSPAN3-204ENST00000558394 SLC35A5Q9BS91 424 aa15.26■□□□□ 0.03
TSPAN3-204ENST00000558394 SLC38A1Q9H2H9 487 aa15.26■□□□□ 0.03
TSPAN3-204ENST00000558394 PRAMEF27A3QJZ7 478 aa15.25■□□□□ 0.03
TSPAN3-204ENST00000558394 POM121CA8CG34 1229 aa15.25■□□□□ 0.03
TSPAN3-204ENST00000558394 HMGN4O00479 90 aa15.25■□□□□ 0.03
TSPAN3-204ENST00000558394 RP2O75695 350 aa15.25■□□□□ 0.03
TSPAN3-204ENST00000558394 NCR1O76036 304 aa15.25■□□□□ 0.03
TSPAN3-204ENST00000558394 RAB36O95755 333 aa15.25■□□□□ 0.03
TSPAN3-204ENST00000558394 GKN3PP0CG01 181 aa15.25■□□□□ 0.03
TSPAN3-204ENST00000558394 NR2F1P10589 423 aa15.25■□□□□ 0.03
TSPAN3-204ENST00000558394 PNMTP11086 282 aa15.25■□□□□ 0.03
TSPAN3-204ENST00000558394 PIGFQ07326 219 aa15.25■□□□□ 0.03
TSPAN3-204ENST00000558394 ALKBH6Q3KRA9 238 aa15.25■□□□□ 0.03
TSPAN3-204ENST00000558394 ATG16L1Q676U5 607 aa15.25■□□□□ 0.03
TSPAN3-204ENST00000558394 TMEM154Q6P9G4 183 aa15.25■□□□□ 0.03
TSPAN3-204ENST00000558394 LRP11Q86VZ4 500 aa15.25■□□□□ 0.03
TSPAN3-204ENST00000558394 MNS1Q8NEH6 495 aa15.25■□□□□ 0.03
TSPAN3-204ENST00000558394 MFSD8Q8NHS3 518 aa15.25■□□□□ 0.03
TSPAN3-204ENST00000558394 RNF217Q8TC41 542 aa15.25■□□□□ 0.03
TSPAN3-204ENST00000558394 SNX33Q8WV41 574 aa15.25■□□□□ 0.03
TSPAN3-204ENST00000558394 OXGR1Q96P68 337 aa15.25■□□□□ 0.03
TSPAN3-204ENST00000558394 ZMAT3Q9HA38 289 aaKnown RBP15.25■□□□□ 0.03
TSPAN3-204ENST00000558394 MED29Q9NX70 200 aa15.25■□□□□ 0.03
TSPAN3-204ENST00000558394 SMIM23A6NLE4 172 aa15.24■□□□□ 0.03
TSPAN3-204ENST00000558394 M0R3G1 203 aa15.24■□□□□ 0.03
TSPAN3-204ENST00000558394 TPD52L2O43399 206 aaKnown RBP15.24■□□□□ 0.03
TSPAN3-204ENST00000558394 ZNF35P13682 527 aa15.24■□□□□ 0.03
TSPAN3-204ENST00000558394 PRTN3P24158 256 aa15.24■□□□□ 0.03
TSPAN3-204ENST00000558394 ZFP36P26651 326 aaKnown RBP15.24■□□□□ 0.03
TSPAN3-204ENST00000558394 ALDH3A1P30838 453 aa15.24■□□□□ 0.03
TSPAN3-204ENST00000558394 PTDSS1P48651 473 aaKnown RBP15.24■□□□□ 0.03
TSPAN3-204ENST00000558394 IL13RA1P78552 427 aa15.24■□□□□ 0.03
TSPAN3-204ENST00000558394 EMX2Q04743 252 aa15.24■□□□□ 0.03
TSPAN3-204ENST00000558394 RETREG3Q86VR2 466 aa15.24■□□□□ 0.03
TSPAN3-204ENST00000558394 RNF130Q86XS8 419 aa15.24■□□□□ 0.03
TSPAN3-204ENST00000558394 C4orf33Q8N1A6 199 aa15.24■□□□□ 0.03
TSPAN3-204ENST00000558394 SIGLECL1Q8N7X8 197 aa15.24■□□□□ 0.03
TSPAN3-204ENST00000558394 STK35Q8TDR2 534 aa15.24■□□□□ 0.03
TSPAN3-204ENST00000558394 ZNF837Q96EG3 531 aaPredicted RBP15.24■□□□□ 0.03
TSPAN3-204ENST00000558394 TIMD4Q96H15 378 aa15.24■□□□□ 0.03
TSPAN3-204ENST00000558394 CACYBPQ9HB71 228 aaKnown RBP15.24■□□□□ 0.03
TSPAN3-204ENST00000558394 B3GAT2Q9NPZ5 323 aa15.24■□□□□ 0.03
TSPAN3-204ENST00000558394 RLIMQ9NVW2 624 aa15.24■□□□□ 0.03
TSPAN3-204ENST00000558394 MYEF2Q9P2K5 600 aaKnown RBP15.24■□□□□ 0.03
TSPAN3-204ENST00000558394 SLC7A8Q9UHI5 535 aa15.24■□□□□ 0.03
TSPAN3-204ENST00000558394 RPS4Y1P22090 263 aaKnown RBP15.23■□□□□ 0.03
TSPAN3-204ENST00000558394 MAGEB1P43366 347 aa15.23■□□□□ 0.03
TSPAN3-204ENST00000558394 RPS5P46782 204 aaKnown RBP15.23■□□□□ 0.03
TSPAN3-204ENST00000558394 TXNL4AP83876 142 aaKnown RBP15.23■□□□□ 0.03
TSPAN3-204ENST00000558394 PCGF3Q3KNV8 242 aa15.23■□□□□ 0.03
TSPAN3-204ENST00000558394 LIN52Q52LA3 116 aa15.23■□□□□ 0.03
TSPAN3-204ENST00000558394 ZNF813Q6ZN06 617 aa15.23■□□□□ 0.03
TSPAN3-204ENST00000558394 SNX32Q86XE0 403 aa15.23■□□□□ 0.03
TSPAN3-204ENST00000558394 TRIML2Q8N7C3 387 aa15.23■□□□□ 0.03
TSPAN3-204ENST00000558394 DUX5Q96PT3 197 aa15.23■□□□□ 0.03
TSPAN3-204ENST00000558394 GPA33Q99795 319 aa15.23■□□□□ 0.03
TSPAN3-204ENST00000558394 B3GNT2Q9NY97 397 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms