RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 PPP2R2BQ00005 443 aa10.4□□□□□ -0.74
HERC1-202ENST00000558324 POU3F1Q03052 451 aaPredicted RBP10.4□□□□□ -0.74
HERC1-202ENST00000558324 RBBP4Q09028 425 aa10.4□□□□□ -0.74
HERC1-202ENST00000558324 PMS2P3Q13401 168 aa10.4□□□□□ -0.74
HERC1-202ENST00000558324 NPTX1Q15818 432 aa10.4□□□□□ -0.74
HERC1-202ENST00000558324 NRF1Q16656 503 aa10.4□□□□□ -0.74
HERC1-202ENST00000558324 ZNF544Q6NX49 715 aa10.4□□□□□ -0.74
HERC1-202ENST00000558324 ANKRD16Q6P6B7 361 aa10.4□□□□□ -0.74
HERC1-202ENST00000558324 NET1Q7Z628 596 aaPredicted RBP10.4□□□□□ -0.74
HERC1-202ENST00000558324 RBM45Q8IUH3 476 aaKnown RBP10.4□□□□□ -0.74
HERC1-202ENST00000558324 OR6T1Q8NGN1 323 aa10.4□□□□□ -0.74
HERC1-202ENST00000558324 OR10A6Q8NH74 314 aa10.4□□□□□ -0.74
HERC1-202ENST00000558324 BCL2L2Q92843 193 aaPredicted RBP10.4□□□□□ -0.74
HERC1-202ENST00000558324 FBXO17Q96EF6 278 aa10.4□□□□□ -0.74
HERC1-202ENST00000558324 SLC38A2Q96QD8 506 aa10.4□□□□□ -0.74
HERC1-202ENST00000558324 OR2M2Q96R28 347 aa10.4□□□□□ -0.74
HERC1-202ENST00000558324 ARHGDIGQ99819 225 aa10.4□□□□□ -0.74
HERC1-202ENST00000558324 EMC6Q9BV81 110 aa10.4□□□□□ -0.74
HERC1-202ENST00000558324 LINC00470Q9BZP3 86 aa10.4□□□□□ -0.74
HERC1-202ENST00000558324 GRIP2Q9C0E4 1043 aa10.4□□□□□ -0.74
HERC1-202ENST00000558324 NELFAQ9H3P2 528 aa10.4□□□□□ -0.74
HERC1-202ENST00000558324 KAT8Q9H7Z6 458 aaKnown RBP10.4□□□□□ -0.74
HERC1-202ENST00000558324 SEC61A2Q9H9S3 476 aa10.4□□□□□ -0.74
HERC1-202ENST00000558324 CRLF2Q9HC73 371 aa10.4□□□□□ -0.74
HERC1-202ENST00000558324 OBP2BQ9NPH6 170 aa10.4□□□□□ -0.74
HERC1-202ENST00000558324 MED29Q9NX70 200 aa10.4□□□□□ -0.74
HERC1-202ENST00000558324 KPNA4O00629 521 aaPredicted RBP10.39□□□□□ -0.75
HERC1-202ENST00000558324 AKAP8O43823 692 aaKnown RBP10.39□□□□□ -0.75
HERC1-202ENST00000558324 FZD7O75084 574 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 CECR9P0C854 216 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 AHCYP23526 432 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 PCGF2P35227 344 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 CAPZA2P47755 286 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 SH3BGRP55822 239 aaPredicted RBP10.39□□□□□ -0.75
HERC1-202ENST00000558324 KRTAP1-1Q07627 177 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 RAB35Q15286 201 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 CEACAM16Q2WEN9 425 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 TRMT5Q32P41 509 aaKnown RBP10.39□□□□□ -0.75
HERC1-202ENST00000558324 MMEL1Q495T6 779 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 RABL3Q5HYI8 236 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 ENTPD8Q5MY95 495 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 PHYHD1Q5SRE7 291 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 METTL21CQ5VZV1 264 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 VHLLQ6RSH7 139 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 WDR88Q6ZMY6 472 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 PATL1Q86TB9 770 aaKnown RBP10.39□□□□□ -0.75
HERC1-202ENST00000558324 TMEM123Q8N131 208 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 PIK3C3Q8NEB9 887 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 OR4D11Q8NGI4 311 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 SLC26A7Q8TE54 656 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 TSPEARQ8WU66 669 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 TAMM41Q96BW9 452 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 ZNF837Q96EG3 531 aaPredicted RBP10.39□□□□□ -0.75
HERC1-202ENST00000558324 GPR35Q9HC97 309 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 CORINQ9Y5Q5 1042 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 CADP27708 2225 aa10.39□□□□□ -0.75
HERC1-202ENST00000558324 IGHV4-30-2A0A087WSY4 118 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 ARPC4-TTLL3A0A0A6YYG9 625 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 C11orf98E9PRG8 122 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 MS4A18H0YCH9 400 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 MRASO14807 208 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 CHP2O43745 196 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 FMO6PO60774 539 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 LY6HO94772 140 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 CRYAAP02489 173 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 TP53P04637 393 aaPredicted RBP10.38□□□□□ -0.75
HERC1-202ENST00000558324 VIMP08670 466 aaKnown RBP10.38□□□□□ -0.75
HERC1-202ENST00000558324 CELA3BP08861 270 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 CD247P20963 164 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 APOBEC3AP31941 199 aaPredicted RBP10.38□□□□□ -0.75
HERC1-202ENST00000558324 IDH3GP51553 393 aaPredicted RBP10.38□□□□□ -0.75
HERC1-202ENST00000558324 ARFIP2P53365 341 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 NAAAQ02083 359 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 CHRNB3Q05901 458 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 PUDPQ08623 228 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 NPRL3Q12980 569 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 CAMK2DQ13557 499 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 CYLC2Q14093 348 aaPredicted RBP10.38□□□□□ -0.75
HERC1-202ENST00000558324 MFSD13AQ14CX5 517 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 VMACQ2NL98 169 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 MS4A18Q3C1V0 323 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 SWT1Q5T5J6 900 aaKnown RBP10.38□□□□□ -0.75
HERC1-202ENST00000558324 INTS11Q5TA45 600 aaKnown RBP10.38□□□□□ -0.75
HERC1-202ENST00000558324 REP15Q6BDI9 236 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 CGB2Q6NT52 195 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 ZNF613Q6PF04 617 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 CLEC2AQ6UVW9 174 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 DNM1P46Q6ZS02 220 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 MYPOPQ86VE0 399 aaPredicted RBP10.38□□□□□ -0.75
HERC1-202ENST00000558324 TSPYL5Q86VY4 417 aaPredicted RBP10.38□□□□□ -0.75
HERC1-202ENST00000558324 SNX32Q86XE0 403 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 SLC30A8Q8IWU4 369 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 ZNF525Q8N782 197 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 SCAIQ8N9R8 606 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 ADPRHL1Q8NDY3 354 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 ADAMTS16Q8TE57 1224 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 SLC41A3Q96GZ6 507 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 BOD1Q96IK1 185 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 TXNDC15Q96J42 360 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 RHNO1Q9BSD3 238 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms