RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 ECDO95905 644 aaPredicted RBP7.57□□□□□ -1.2
SPG11-209ENST00000558253 CTSBP07858 339 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 MRPL3P09001 348 aaKnown RBP7.57□□□□□ -1.2
SPG11-209ENST00000558253 FAM157BP0CG42 384 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 CALCBP10092 127 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 SRMP19623 302 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 ALAS2P22557 587 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 IGFBP4P22692 258 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 EDNRAP25101 427 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 SLC6A1P30531 599 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 MNDAP41218 407 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 ARRB1P49407 418 aaPredicted RBP7.57□□□□□ -1.2
SPG11-209ENST00000558253 POLR2HP52434 150 aaKnown RBP7.57□□□□□ -1.2
SPG11-209ENST00000558253 DLX5P56178 289 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 CAV3P56539 151 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 SLC26A5P58743 744 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 CTXN1P60606 82 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 ERVK-25P63136 954 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 E2F1Q01094 437 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 ACY1Q03154 408 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 RASGEF1BQ0VAM2 473 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 C19orf57Q0VDD7 668 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 ERV3-1Q14264 604 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 TBRG1Q3YBR2 411 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 UBE2NLQ5JXB2 153 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 ZNF684Q5T5D7 378 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 FAM205BPQ63HN1 556 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 ZNF57Q68EA5 555 aaPredicted RBP7.57□□□□□ -1.2
SPG11-209ENST00000558253 FDX2Q6P4F2 183 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 LEG1Q6P5S2 330 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 TTLL10Q6ZVT0 673 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 SPATC1Q76KD6 591 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 SAMD12Q8N8I0 201 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 EXD3Q8N9H8 876 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 SPERTQ8NA61 448 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 OR5J2Q8NH18 312 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 TRMT10AQ8TBZ6 339 aaKnown RBP7.57□□□□□ -1.2
SPG11-209ENST00000558253 SUN5Q8TC36 379 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 RLN3Q8WXF3 142 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 TMEM234Q8WY98 164 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 CLDN23Q96B33 292 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 ZMYND19Q96E35 227 aaPredicted RBP7.57□□□□□ -1.2
SPG11-209ENST00000558253 ST6GAL2Q96JF0 529 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 KLHL15Q96M94 604 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 DCLRE1CQ96SD1 692 aaKnown RBP7.57□□□□□ -1.2
SPG11-209ENST00000558253 NMNAT3Q96T66 252 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 DUSP23Q9BVJ7 150 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 RBCK1Q9BYM8 510 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 TBL1XR1Q9BZK7 514 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 OR8D2Q9GZM6 311 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 LRRN3Q9H3W5 708 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 ZNF768Q9H5H4 540 aaKnown RBP7.57□□□□□ -1.2
SPG11-209ENST00000558253 SLA2Q9H6Q3 261 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 UBE2ZQ9H832 354 aaPredicted RBP7.57□□□□□ -1.2
SPG11-209ENST00000558253 MARCH7Q9H992 704 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 DDX28Q9NUL7 540 aaKnown RBP7.57□□□□□ -1.2
SPG11-209ENST00000558253 GNG8Q9UK08 70 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 N6AMT1Q9Y5N5 214 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 NUBP2Q9Y5Y2 271 aa7.57□□□□□ -1.2
SPG11-209ENST00000558253 FANCMQ8IYD8 2048 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 CCDC163A0A0D9SF12 145 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 TEX13CA0A0J9YWL9 993 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 ZC3H12DA2A288 527 aaKnown RBP7.56□□□□□ -1.2
SPG11-209ENST00000558253 A6NIZ1 184 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 NPIPB13A6NJU9 1138 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 TMEM212A6NML5 194 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 A8MVM7 634 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 NPIPB4C9JG80 1138 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 INMT-MINDY4F8WBC2 141 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 BLOC1S5-TXNDC5H3BN57 136 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 AIPO00170 330 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 XKRYO14609 159 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 YKT6O15498 198 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 SNRNP200O75643 2136 aaKnown RBP7.56□□□□□ -1.2
SPG11-209ENST00000558253 ONECUT2O95948 504 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 IGHMP01871 453 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 TFP02787 698 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 ANKRD34CP0C6C1 535 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 CLUP10909 449 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 PSKH1P11801 424 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 NAT1P18440 290 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 CFPP27918 469 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 TACR3P29371 465 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 HOXA6P31267 233 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 ACVR1BP36896 505 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 AQP2P41181 271 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 P2RX1P51575 399 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 CCR9P51686 369 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 GFERP55789 205 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 RAP1BP61224 184 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 RAP1AP62834 184 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 CD300CQ08708 224 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 PLCXD2Q0VAA5 305 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 UBXN2BQ14CS0 331 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 EBPQ15125 230 aaKnown RBP7.56□□□□□ -1.2
SPG11-209ENST00000558253 ANGPT1Q15389 498 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 P2RY14Q15391 338 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 NSDHLQ15738 373 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 SGCBQ16585 318 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 TATDN3Q17R31 274 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms