RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 ZSWIM7Q19AV6 140 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 TIGD2Q4W5G0 525 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 SLC25A53Q5H9E4 307 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 C9orf135Q5VTT2 229 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 OR7E24Q6IFN5 339 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 CDC73Q6P1J9 531 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 C3orf33Q6P1S2 294 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 PET117Q6UWS5 81 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 CYP2R1Q6VVX0 501 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 TMPPEQ6ZT21 453 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 SLC46A3Q7Z3Q1 461 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 SPATA21Q7Z572 469 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 GALNT4Q8N4A0 578 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 OR52E4Q8NGH9 312 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 OR5W2Q8NH69 310 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 SGMS2Q8NHU3 365 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 RFWD2Q8NHY2 731 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 ZFP28Q8NHY6 868 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 ZFAND2BQ8WV99 257 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 DCAKDQ8WVC6 231 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 LZICQ8WZA0 190 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 ZMYND19Q96E35 227 aaPredicted RBP5.09□□□□□ -1.59
VPS33B-207ENST00000557470 L3HYPDHQ96EM0 354 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 CHMP6Q96FZ7 201 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 MUS81Q96NY9 551 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 STACQ99469 402 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 FOXB1Q99853 325 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 FUZQ9BT04 418 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 CDADC1Q9BWV3 514 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 FUT8Q9BYC5 575 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 RAB17Q9H0T7 212 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 GSTO2Q9H4Y5 243 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 TNFRSF12AQ9NP84 129 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 MYOZ1Q9NP98 299 aaPredicted RBP5.09□□□□□ -1.59
VPS33B-207ENST00000557470 MID1IP1Q9NPA3 183 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 SLC17A5Q9NRA2 495 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 DUSP22Q9NRW4 184 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 SIRT3Q9NTG7 399 aaPredicted RBP5.09□□□□□ -1.59
VPS33B-207ENST00000557470 ZDHHC18Q9NUE0 388 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 AP5S1Q9NUS5 200 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 MRPL15Q9P015 296 aaKnown RBP5.09□□□□□ -1.59
VPS33B-207ENST00000557470 TMEM216Q9P0N5 145 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 MOKQ9UQ07 419 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 STK38LQ9Y2H1 464 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 NOSIPQ9Y314 301 aaKnown RBP5.09□□□□□ -1.59
VPS33B-207ENST00000557470 KCNE3Q9Y6H6 103 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 A0A1W2PQ09 198 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 POC1B-GALNT4F8VUJ3 575 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 H0YAE9 185 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 H3BNH8 94 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 ZNF264O43296 627 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 EIF4E2O60573 245 aaKnown RBP5.08□□□□□ -1.6
VPS33B-207ENST00000557470 MRPL33O75394 65 aaKnown RBP5.08□□□□□ -1.6
VPS33B-207ENST00000557470 HMGN2P05204 90 aaKnown RBP5.08□□□□□ -1.6
VPS33B-207ENST00000557470 SDC1P18827 310 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 GIFP27352 417 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 APEX1P27695 318 aaKnown RBP5.08□□□□□ -1.6
VPS33B-207ENST00000557470 COMPP49747 757 aaPredicted RBP5.08□□□□□ -1.6
VPS33B-207ENST00000557470 CHN2P52757 468 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 CDH15P55291 814 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 SH3BGRP55822 239 aaPredicted RBP5.08□□□□□ -1.6
VPS33B-207ENST00000557470 CSNK2A1P68400 391 aaPredicted RBP5.08□□□□□ -1.6
VPS33B-207ENST00000557470 MERTKQ12866 999 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 SKP2Q13309 424 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 PDE7AQ13946 482 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 CBFBQ13951 182 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 HABP2Q14520 560 aaPredicted RBP5.08□□□□□ -1.6
VPS33B-207ENST00000557470 LASP1Q14847 261 aaKnown RBP5.08□□□□□ -1.6
VPS33B-207ENST00000557470 KIAA0040Q15053 153 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 PDK3Q15120 406 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 SYT14P1Q58G82 188 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 DCST2Q5T1A1 773 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 PDZK1Q5T2W1 519 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 OGFOD2Q6N063 350 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 ZCCHC12Q6PEW1 402 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 CASP12Q6UXS9 341 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 SPATA19Q7Z5L4 167 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 FAM90A1Q86YD7 464 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 SLC22A9Q8IVM8 553 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 GLB1L2Q8IW92 636 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 C17orf78Q8N4C9 275 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 CCNYL1Q8N7R7 359 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 C3orf56Q8N813 242 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 ZNF614Q8N883 585 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 LINC01356Q8N9X3 169 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 CLHC1Q8NHS4 586 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 FAM81AQ8TBF8 368 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 PPCDCQ96CD2 204 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 DNAJA3Q96EY1 480 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 THOC1Q96FV9 657 aaKnown RBP5.08□□□□□ -1.6
VPS33B-207ENST00000557470 TSSK3Q96PN8 268 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 RAB3IPQ96QF0 476 aaPredicted RBP5.08□□□□□ -1.6
VPS33B-207ENST00000557470 SNX18Q96RF0 628 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 ATP6V0BQ99437 205 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 CCT7Q99832 543 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 HOXD1Q9GZZ0 328 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 PIGUQ9H490 435 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 REEP4Q9H6H4 257 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 OPA3Q9H6K4 179 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 METTL17Q9H7H0 456 aaPredicted RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms