RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 GSG1Q2KHT4 349 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 TMEM155Q4W5P6 130 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 EXOSC6Q5RKV6 272 aaKnown RBP7.82□□□□□ -1.16
NEDD1-211ENST00000557454 PRAMEF8Q5VWM4 474 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 PRAMEF7Q5VXH5 474 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 SLC35E4Q6ICL7 350 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 LETMD1Q6P1Q0 360 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 C6orf89Q6UWU4 347 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 C1orf122Q6ZSJ8 110 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 LDLRAD3Q86YD5 345 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 MUC20Q8N307 709 aaPredicted RBP7.82□□□□□ -1.16
NEDD1-211ENST00000557454 TMEM99Q8N816 258 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 SYNPRQ8TBG9 265 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 RAB40AQ8WXH6 277 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 LRTOMTQ8WZ04 291 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 ZNF837Q96EG3 531 aaPredicted RBP7.82□□□□□ -1.16
NEDD1-211ENST00000557454 ZNF75AQ96N20 296 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 SF3B5Q9BWJ5 86 aaKnown RBP7.82□□□□□ -1.16
NEDD1-211ENST00000557454 SSBP3Q9BWW4 388 aaPredicted RBP7.82□□□□□ -1.16
NEDD1-211ENST00000557454 OR51B6Q9H340 312 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 NSMCE4AQ9NXX6 385 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 SLCO1C1Q9NYB5 712 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 FBLN5Q9UBX5 448 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 SLC7A8Q9UHI5 535 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 PCTPQ9UKL6 214 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 NFU1Q9UMS0 254 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 LRCH1Q9Y2L9 728 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 TNPO3Q9Y5L0 923 aaKnown RBP7.82□□□□□ -1.16
NEDD1-211ENST00000557454 TEX264Q9Y6I9 313 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 USH1CQ9Y6N9 552 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 A0A0U1RQK1 487 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 SLC22A23A1A5C7 686 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 ANKRD28O15084 1053 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 TM9SF1O15321 606 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 MBD3O95983 291 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 IGHV1-46P01743 117 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 ANXA4P09525 319 aaPredicted RBP7.81□□□□□ -1.16
NEDD1-211ENST00000557454 UBTFL6P0CB48 400 aaPredicted RBP7.81□□□□□ -1.16
NEDD1-211ENST00000557454 SNRPBP14678 240 aaKnown RBP7.81□□□□□ -1.16
NEDD1-211ENST00000557454 ZNF250P15622 560 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 ETV4P43268 484 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 PTDSS1P48651 473 aaKnown RBP7.81□□□□□ -1.16
NEDD1-211ENST00000557454 CLK1P49759 484 aaKnown RBP7.81□□□□□ -1.16
NEDD1-211ENST00000557454 ZNF81P51508 661 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 EMX1Q04741 257 aaPredicted RBP7.81□□□□□ -1.16
NEDD1-211ENST00000557454 ACSM2AQ08AH3 577 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 DCTN2Q13561 401 aaKnown RBP7.81□□□□□ -1.16
NEDD1-211ENST00000557454 ZMYND11Q15326 602 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 CEACAM16Q2WEN9 425 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 SPRNQ5BIV9 151 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 TTMPQ5BVD1 217 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 FAM209AQ5JX71 171 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 DCST2Q5T1A1 773 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 PDZK1Q5T2W1 519 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 ACSM2BQ68CK6 577 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 FRRS1Q6ZNA5 592 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 RPS27LQ71UM5 84 aaKnown RBP7.81□□□□□ -1.16
NEDD1-211ENST00000557454 CCDC36Q8IYA8 594 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 PTGR2Q8N8N7 351 aaPredicted RBP7.81□□□□□ -1.16
NEDD1-211ENST00000557454 WFDC9Q8NEX5 89 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 Q8NFD4 153 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 GEMIN6Q8WXD5 167 aaKnown RBP7.81□□□□□ -1.16
NEDD1-211ENST00000557454 MAGOHBQ96A72 148 aaKnown RBP7.81□□□□□ -1.16
NEDD1-211ENST00000557454 ACPTQ9BZG2 426 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 LINC00470Q9BZP3 86 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 NANOGQ9H9S0 305 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 GPR35Q9HC97 309 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 ACOXLQ9NUZ1 547 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 TAS2R7Q9NYW3 318 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 SNX6Q9UNH7 406 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 RCE1Q9Y256 329 aa7.81□□□□□ -1.16
NEDD1-211ENST00000557454 CENPVL1A0A0U1RR11 272 aa7.8□□□□□ -1.16
NEDD1-211ENST00000557454 ZC3H12DA2A288 527 aaKnown RBP7.8□□□□□ -1.16
NEDD1-211ENST00000557454 AQP7P3A6NL99 342 aa7.8□□□□□ -1.16
NEDD1-211ENST00000557454 CEACAM18A8MTB9 384 aa7.8□□□□□ -1.16
NEDD1-211ENST00000557454 ADARB2-AS1A8MUL3 147 aa7.8□□□□□ -1.16
NEDD1-211ENST00000557454 RPL36A-HNRNPH2H7BZ11 118 aa7.8□□□□□ -1.16
NEDD1-211ENST00000557454 PPP6CO00743 305 aa7.8□□□□□ -1.16
NEDD1-211ENST00000557454 DNALI1O14645 258 aaPredicted RBP7.8□□□□□ -1.16
NEDD1-211ENST00000557454 ZNF500O60304 480 aaPredicted RBP7.8□□□□□ -1.16
NEDD1-211ENST00000557454 SLC43A1O75387 559 aa7.8□□□□□ -1.16
NEDD1-211ENST00000557454 MT-ND5P03915 603 aa7.8□□□□□ -1.16
NEDD1-211ENST00000557454 UQCRC2P22695 453 aa7.8□□□□□ -1.16
NEDD1-211ENST00000557454 LMO1P25800 156 aa7.8□□□□□ -1.16
NEDD1-211ENST00000557454 LSP1P33241 339 aa7.8□□□□□ -1.16
NEDD1-211ENST00000557454 TGFBR2P37173 567 aa7.8□□□□□ -1.16
NEDD1-211ENST00000557454 GIPRP48546 466 aa7.8□□□□□ -1.16
NEDD1-211ENST00000557454 BTG1P62324 171 aa7.8□□□□□ -1.16
NEDD1-211ENST00000557454 EGFEM1PQ0D2K5 195 aa7.8□□□□□ -1.16
NEDD1-211ENST00000557454 SPIN4Q56A73 249 aa7.8□□□□□ -1.16
NEDD1-211ENST00000557454 FAM71E1Q6IPT2 247 aa7.8□□□□□ -1.16
NEDD1-211ENST00000557454 ZNF774Q6NX45 483 aa7.8□□□□□ -1.16
NEDD1-211ENST00000557454 METTL2BQ6P1Q9 378 aaKnown RBP7.8□□□□□ -1.16
NEDD1-211ENST00000557454 CREB3L2Q70SY1 520 aa7.8□□□□□ -1.16
NEDD1-211ENST00000557454 GRINAQ7Z429 371 aa7.8□□□□□ -1.16
NEDD1-211ENST00000557454 CENPLQ8N0S6 344 aaPredicted RBP7.8□□□□□ -1.16
NEDD1-211ENST00000557454 PDIK1LQ8N165 341 aa7.8□□□□□ -1.16
NEDD1-211ENST00000557454 ZNF563Q8TA94 476 aa7.8□□□□□ -1.16
NEDD1-211ENST00000557454 RHEBL1Q8TAI7 183 aa7.8□□□□□ -1.16
NEDD1-211ENST00000557454 GATAD2BQ8WXI9 593 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms