RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 COX6B1P14854 86 aa15.47■□□□□ 0.07
SHMT2-225ENST00000556798 SELENOPP49908 381 aa15.47■□□□□ 0.07
SHMT2-225ENST00000556798 TSC22D1Q15714 1073 aa15.47■□□□□ 0.07
SHMT2-225ENST00000556798 BEND4Q6ZU67 534 aa15.47■□□□□ 0.07
SHMT2-225ENST00000556798 HIST3H2AQ7L7L0 130 aa15.47■□□□□ 0.07
SHMT2-225ENST00000556798 RRM2BQ7LG56 351 aa15.47■□□□□ 0.07
SHMT2-225ENST00000556798 CXorf67Q86X51 503 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-225ENST00000556798 DMRTC2Q8IXT2 367 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-225ENST00000556798 GABRG1Q8N1C3 465 aa15.47■□□□□ 0.07
SHMT2-225ENST00000556798 UBE2J2Q8N2K1 259 aa15.47■□□□□ 0.07
SHMT2-225ENST00000556798 ACBD4Q8NC06 268 aa15.47■□□□□ 0.07
SHMT2-225ENST00000556798 HIST1H2ACQ93077 130 aa15.47■□□□□ 0.07
SHMT2-225ENST00000556798 FAM46AQ96IP4 442 aaKnown RBP15.47■□□□□ 0.07
SHMT2-225ENST00000556798 FUZQ9BT04 418 aa15.47■□□□□ 0.07
SHMT2-225ENST00000556798 MMADHCQ9H3L0 296 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-225ENST00000556798 ELOVL5Q9NYP7 299 aa15.47■□□□□ 0.07
SHMT2-225ENST00000556798 TAS2R5Q9NYW4 299 aa15.47■□□□□ 0.07
SHMT2-225ENST00000556798 FLNBO75369 2602 aaKnown RBP15.47■□□□□ 0.07
SHMT2-225ENST00000556798 TCRBV3S1A0A5B6 114 aa15.46■□□□□ 0.07
SHMT2-225ENST00000556798 RNF13O43567 381 aa15.46■□□□□ 0.07
SHMT2-225ENST00000556798 ADAP00813 363 aa15.46■□□□□ 0.07
SHMT2-225ENST00000556798 RAP2AP10114 183 aa15.46■□□□□ 0.07
SHMT2-225ENST00000556798 RPL18Q07020 188 aaKnown RBP15.46■□□□□ 0.07
SHMT2-225ENST00000556798 LGALS3BPQ08380 585 aa15.46■□□□□ 0.07
SHMT2-225ENST00000556798 C1orf146Q5VVC0 180 aa15.46■□□□□ 0.07
SHMT2-225ENST00000556798 NIPAL3Q6P499 406 aa15.46■□□□□ 0.07
SHMT2-225ENST00000556798 KIF18BQ86Y91 864 aa15.46■□□□□ 0.07
SHMT2-225ENST00000556798 RNF113BQ8IZP6 322 aaKnown RBP15.46■□□□□ 0.07
SHMT2-225ENST00000556798 OR4K5Q8NGD3 323 aa15.46■□□□□ 0.07
SHMT2-225ENST00000556798 OR13C2Q8NGS9 318 aa15.46■□□□□ 0.07
SHMT2-225ENST00000556798 LINC01560Q8TB33 94 aa15.46■□□□□ 0.07
SHMT2-225ENST00000556798 POP5Q969H6 163 aaKnown RBP15.46■□□□□ 0.07
SHMT2-225ENST00000556798 UTP4Q969X6 686 aaKnown RBP15.46■□□□□ 0.07
SHMT2-225ENST00000556798 ALPK1Q96QP1 1244 aa15.46■□□□□ 0.07
SHMT2-225ENST00000556798 PARPBPQ9NWS1 579 aa15.46■□□□□ 0.07
SHMT2-225ENST00000556798 MED29Q9NX70 200 aa15.46■□□□□ 0.07
SHMT2-225ENST00000556798 VNN3Q9NY84 501 aa15.46■□□□□ 0.07
SHMT2-225ENST00000556798 PRR14LQ5THK1 2151 aa15.46■□□□□ 0.07
SHMT2-225ENST00000556798 TRAV27A0A087WT01 109 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 LOC102725191A0A1B0GVB3 256 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 SH3PXD2BA1X283 911 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 EFCAB9A8MZ26 197 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 UGT2B10P36537 528 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 AQP2P41181 271 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 SMIM11AP58511 58 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 SORDQ00796 357 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 PPP1R8Q12972 351 aaKnown RBP15.45■□□□□ 0.06
SHMT2-225ENST00000556798 TSPO2Q5TGU0 170 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 FBXW9Q5XUX1 488 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 ANKRD34AQ69YU3 496 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 STAC2Q6ZMT1 411 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 Q6ZT83 130 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 PXKQ7Z7A4 578 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 WDFY1Q8IWB7 410 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 MOSPD2Q8NHP6 518 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 LIPHQ8WWY8 451 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 RSRC1Q96IZ7 334 aaKnown RBP15.45■□□□□ 0.06
SHMT2-225ENST00000556798 TXNDC15Q96J42 360 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 SPOCK3Q9BQ16 436 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 EMC6Q9BV81 110 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 CHID1Q9BWS9 393 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 SLC7A10Q9NS82 523 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 NOX1Q9Y5S8 564 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 LYVE1Q9Y5Y7 322 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 CENPEQ02224 2701 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 NBPF19A0A087WUL8 3843 aa15.45■□□□□ 0.06
SHMT2-225ENST00000556798 TUBAL3A6NHL2 446 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 C16orf97H3BN30 126 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 CDC42EP2O14613 210 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 CIB2O75838 187 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 LYZL6O75951 148 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 F13BP05160 661 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 IFNGR1P15260 489 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 IGHV1-2P23083 117 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 KIR2DL3P43628 341 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 OMPP47874 163 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 FOXG1P55316 489 aaPredicted RBP15.44■□□□□ 0.06
SHMT2-225ENST00000556798 ZP4Q12836 540 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 FAPQ12884 760 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 MELKQ14680 651 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 C9orf135Q5VTT2 229 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 CARD17Q5XLA6 110 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 OR2T5Q6IEZ7 315 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 CDK20Q8IZL9 346 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 ANKK1Q8NFD2 765 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 OR2T29Q8NH02 315 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 OR51A7Q8NH64 312 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 ALKBH3Q96Q83 286 aaPredicted RBP15.44■□□□□ 0.06
SHMT2-225ENST00000556798 SLCO5A1Q9H2Y9 848 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 FANCFQ9NPI8 374 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 CRIM1Q9NZV1 1036 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 UPB1Q9UBR1 384 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 RCE1Q9Y256 329 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 TMEM5Q9Y2B1 443 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 U3KQV3 271 aa15.44■□□□□ 0.06
SHMT2-225ENST00000556798 HTR3EA5X5Y0 456 aa15.43■□□□□ 0.06
SHMT2-225ENST00000556798 TNFRSF11BO00300 401 aa15.43■□□□□ 0.06
SHMT2-225ENST00000556798 AKAP8O43823 692 aaKnown RBP15.43■□□□□ 0.06
SHMT2-225ENST00000556798 OR10H3O60404 316 aa15.43■□□□□ 0.06
SHMT2-225ENST00000556798 FKBP6O75344 327 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms