RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 NGBQ9NPG2 151 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 ZNF701Q9NV72 531 aaPredicted RBP9.07□□□□□ -0.96
SHMT2-224ENST00000556737 RPS6KB2Q9UBS0 482 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 CD300AQ9UGN4 299 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 MAGEL2Q9UJ55 1249 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 SNX13Q9Y5W8 968 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 C2CD3Q4AC94 2353 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 SETD2Q9BYW2 2564 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-224ENST00000556737 A0A087WUJ7 227 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 A0A1W2PR80 420 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 M0R082 166 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 M0R3H8 397 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 CXCR6O00574 342 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 ARPC2O15144 300 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 VAMP5O95183 116 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 LYPD3O95274 346 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 LGI1O95970 557 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 THY1P04216 161 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 SOD3P08294 240 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 PTNP21246 168 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 SELENOPP49908 381 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 RIPPLY3P57055 190 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 TRAP1Q12931 704 aaKnown RBP9.06□□□□□ -0.96
SHMT2-224ENST00000556737 OR1Q1Q15612 314 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 DUSP7Q16829 419 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 LRRC23Q53EV4 343 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-224ENST00000556737 FAM69AQ5T7M9 428 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 GLYATQ6IB77 296 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 ERICH5Q6P6B1 374 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 C5orf46Q6UWT4 87 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 SSX8Q7RTT4 187 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 AAED1Q7RTV5 226 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 CALHM3Q86XJ0 350 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 C17orf78Q8N4C9 275 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 C1orf162Q8NEQ5 155 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-224ENST00000556737 ZNF417Q8TAU3 575 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 SLC26A7Q8TE54 656 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 DNAJA4Q8WW22 397 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-224ENST00000556737 SLC38A4Q969I6 547 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 TAAR8Q969N4 342 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 FBXW5Q969U6 566 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 SLC25A36Q96CQ1 311 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 BOD1Q96IK1 185 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 NSMCE2Q96MF7 247 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 ZNF583Q96ND8 569 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 ALKBH3Q96Q83 286 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-224ENST00000556737 ZNF587Q96SQ5 575 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-224ENST00000556737 GSX1Q9H4S2 264 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-224ENST00000556737 DENND2DQ9H6A0 471 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-224ENST00000556737 EVA1AQ9H8M9 152 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 SLC17A5Q9NRA2 495 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 PARPBPQ9NWS1 579 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 RASD1Q9Y272 281 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 MAGED1Q9Y5V3 778 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-224ENST00000556737 V9GYQ6 96 aa9.06□□□□□ -0.96
SHMT2-224ENST00000556737 CADP27708 2225 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 NSD1Q96L73 2696 aaPredicted RBP9.05□□□□□ -0.96
SHMT2-224ENST00000556737 TRAV36DV7A0A075B6V5 113 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 CIB4A0PJX0 185 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 OVOL3O00110 214 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 ABCD4O14678 606 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 TRAF3IP2O43734 574 aaPredicted RBP9.05□□□□□ -0.96
SHMT2-224ENST00000556737 FMO6PO60774 539 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 TMCC2O75069 709 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 ENTPD5O75356 428 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 SERPINB7O75635 380 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 BGLAPP02818 100 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 C8BP07358 591 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 FOSL1P15407 271 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 MPGP29372 298 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 GRPRP30550 384 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 CDH12P55289 794 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 MS4A2Q01362 244 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 LTBQ06643 244 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 VMACQ2NL98 169 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 PGGHGQ32M88 737 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 SWT1Q5T5J6 900 aaKnown RBP9.05□□□□□ -0.96
SHMT2-224ENST00000556737 TMEM225Q6GV28 225 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 OR7E24Q6IFN5 339 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 NIPAL3Q6P499 406 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 ULK3Q6PHR2 472 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 PRSS57Q6UWY2 283 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 B3GLCTQ6Y288 498 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 WDR88Q6ZMY6 472 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 CCDC80Q76M96 950 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 PATL1Q86TB9 770 aaKnown RBP9.05□□□□□ -0.96
SHMT2-224ENST00000556737 RANBP3LQ86VV4 465 aaPredicted RBP9.05□□□□□ -0.96
SHMT2-224ENST00000556737 RBM45Q8IUH3 476 aaKnown RBP9.05□□□□□ -0.96
SHMT2-224ENST00000556737 SLC30A8Q8IWU4 369 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 C10orf67Q8IYJ2 551 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 CIARTQ8N365 385 aaPredicted RBP9.05□□□□□ -0.96
SHMT2-224ENST00000556737 KDM8Q8N371 416 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 POMGNT2Q8NAT1 580 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 ADPRHL1Q8NDY3 354 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 OR6T1Q8NGN1 323 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 OR6S1Q8NH40 331 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 TMEM171Q8WVE6 324 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 MUCL1Q96DR8 90 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 SLC47A1Q96FL8 570 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 SLC41A3Q96GZ6 507 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms